Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB0054
Help
Entry
YPTB0054 CDS
T00195
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Pathway
yps00540
Lipopolysaccharide biosynthesis
yps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
YPTB0054 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yps01005
]
YPTB0054 (rfaF)
Enzymes [BR:
yps01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
YPTB0054 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
yps01005
]
Core region
YPTB0054 (rfaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
CAH19294
UniProt:
Q66GC8
LinkDB
All DBs
Position
complement(65449..66513)
Genome browser
AA seq
354 aa
AA seq
DB search
MKILVIGPSWVGDMMMSQSLYRTLKAEYPAADIDVMAPAWCRPLLARMPEVRHAIPMPLG
HGAFAFEERRRLGLALRETEYDRAYVLPNSFKSALIPYFSGIKRRIGWRGEMRYFLLNDL
RILDKQAFPMMVQRYVALAYDKERIRSAADLPQPLLWPQLQVRDEEIAETTASFNLTDNR
PIIGFCPGAEFGPAKRWPHYHYATLAQKLIDDGYQVVLFGSAKDNEAGEDIRQALSDTDR
EYCLNLAGQTSLEQAVVLIAACSAVVSNDSGLMHVAAALNKPLVALYGPSSPDFTPPLSE
KATVIRLITGYHKVRKGDSAQGYHQSLIDIQPEHVMAALEKQLATQECSVKGGD
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactggtcatcggcccttcatgggttggcgatatgatgatgtcgcaaagtctt
taccgtaccctgaaggccgaatatccggcagcagacattgatgtgatggcacccgcatgg
tgccgtccgcttctggccagaatgccggaagtccgtcacgcaattccaatgccgttaggc
catggggcatttgcttttgaggagcgtcgccgtttgggattggccttacgtgaaaccgag
tatgatcgtgcttacgtgttgcccaactcatttaaatccgcgctgataccttacttttca
gggatcaaacgacgtattggctggcgtggcgaaatgcgttatttcctgctcaatgacctc
cgtattctggataagcaagcctttccaatgatggtccagcgctacgttgcgctggcctat
gataaagaacgcatccgttcagcggcagatttaccacaaccgttgttgtggccgcaattg
caagtacgcgatgaagaaattgcagagacaacggcctcattcaatctgaccgataaccgg
cccattattggattctgccctggcgcagaatttgggccagcgaaacgttggccgcattac
cactacgccacgctggcgcagaaattgattgatgatggctatcaggtcgtcttattcggt
tctgcgaaagacaatgaagctggtgaagatatccgtcaggctctcagcgatacagatcgt
gaatattgcctcaatctggcagggcagacctcactggaacaagcggtcgttctcatcgcc
gcctgtagtgccgtcgtgagtaacgactctggtttaatgcatgtcgcggcggcactcaac
aagccattagtggcattgtatggcccgagcagcccagacttcacgccaccactgtcagag
aaagccacggtgatccgtctgattaccggctatcacaaagtccgcaagggcgattctgca
cagggctatcatcaaagtttgattgatatccaacccgaacacgtgatggccgcgcttgag
aagcaattggctacgcaagaatgctcagtcaaagggggcgattaa
DBGET
integrated database retrieval system
