Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB0167
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Entry
YPTB0167 CDS
T00195
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Pathway
yps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YPTB0167 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yps03021
]
YPTB0167 (rho)
03019 Messenger RNA biogenesis [BR:
yps03019
]
YPTB0167 (rho)
Transcription machinery [BR:
yps03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
YPTB0167 (rho)
Messenger RNA biogenesis [BR:
yps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
YPTB0167 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CAH19407
UniProt:
Q66G17
LinkDB
All DBs
Position
199464..200723
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSDLITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVAGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIATSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDF
NRSGTRKEELLTTTDELQKMWILRRILHPMGEIDAMEFLISKLATAKTNDQFFDNMRRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgatctgataacacttggcgaaaat
atggggctggaaaacctggcccggatgcgtaaacaagatattattttctctattctaaag
cagcatgccaaaagtggagaagatatcttcggtgacggtgtattggagatattgcaggat
ggatttggtttcctccgctctgcagacagctcctacctcgccggtcctgacgacatctat
gtatccccaagccaaattcgccgtttcaacctccgcactggtgataccgttgccggtaag
attcgtccgcctaaagaaggcgagcgttattttgcattgttgaaagttaatgaagttaac
tatgacaagccggaaaacgcccgtaataaaatcctattcgaaaacttaacgccgttacat
gccaactctcgtctgcgcatggaacgtggtaatggttcgactgaagatttaaccgcccgt
gtactggatttggcatcgccaattggtcgtggccaacgtggtctgattgtggccccacca
aaagccggtaaaactatgctgttgcagaacatcgcgaccagcattgcttacaatcaccct
gattgtgttttgatggtattgctgattgacgagcgtccagaagaagtaaccgagatgcaa
cgtctggttaaaggtgaagttattgcttctacttttgatgaaccagcatcccgtcacgtt
caagtcgctgaaatggttatcgagaaagcaaaacgtctggttgagcataaaaaagacgtt
attatcttgctggactctattacccgtttagcccgtgcttacaacaccgttgtacctgct
tcaggcaaagtattgaccggtggtgttgatgcgaacgcgttacatcgccctaaacgcttc
tttggtgccgcacgtaatgttgaagagggcggaagcctgaccatcattgcaaccgcgctg
gttgataccggttctaaaatggatgaagttatctacgaagaatttaaaggtaccggtaac
atggaattgcatctgtcccgtaaaattgcggagaaacgtgtattcccagccattgacttc
aaccgctctggtacccgtaaagaagagttgctgactacgactgatgagctacaaaaaatg
tggatcttgcgccgaattcttcatccaatgggtgaaattgatgcaatggaattcctcatc
agtaagctggcgactgcgaaaactaacgatcagttctttgataatatgagacgctcgtaa
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