Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB0172
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Entry
YPTB0172 CDS
T00195
Symbol
rffG
Name
(GenBank) dTDP-D-glucose-4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Pathway
yps00521
Streptomycin biosynthesis
yps00523
Polyketide sugar unit biosynthesis
yps00525
Acarbose and validamycin biosynthesis
yps00541
Biosynthesis of various nucleotide sugars
yps01100
Metabolic pathways
yps01110
Biosynthesis of secondary metabolites
yps01250
Biosynthesis of nucleotide sugars
Module
yps_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
YPTB0172 (rffG)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
YPTB0172 (rffG)
01055 Biosynthesis of vancomycin group antibiotics
YPTB0172 (rffG)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
YPTB0172 (rffG)
00525 Acarbose and validamycin biosynthesis
YPTB0172 (rffG)
Enzymes [BR:
yps01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
YPTB0172 (rffG)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
CAH19412
UniProt:
Q66G12
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All DBs
Position
206186..207253
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AA seq
355 aa
AA seq
DB search
MRRILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLSVVAGSERYAFEQVDI
CDRSELDRVFAQYQPNVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQLS
VEAKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL
PTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQVV
TEGVVGETYNIGGHNERKNIEVVETICALLDELVPAKPAGIAHYRDLITYVKDRPGHDMR
YAIDAGKIERELGWRPQETFESGIRKTVLWYLNNESWWRRVQDGSYAGERLGLSD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgaggcgaattctcgtcacaggcggggccggttttatcggctctgcggtggtcaggcat
attattgatggcacctcagatagcgtggtggtggtcgataaactcacctacgccggtaat
ctggagtcgctgtcagtggttgcgggcagtgagcgttatgctttcgaacaagtcgatatc
tgtgaccgcagtgagttggatcgggttttcgcacagtatcagccgaatgtggtgatgcat
ttggctgccgagagccacgttgaccgctcaattgatggccccgccgcgtttatcgagacg
aacgtggttggcacttacaccctgttggaagctgcccgtcactattggcaacaactgagt
gttgaagccaagcaggcgttccgctttcaccatatctcaacggatgaggtgtatggcgat
ttacacggcactgacgatttgtttaccgaaaccacgccgtatgcgccaagcagcccatat
tcggcgtctaaagcgtccagtgaccatttagtccgggcttggttgcgtacttatggttta
ccgactttggtgactaattgttcaaataattacggcccgtatcacttcccagaaaagctg
atcccgctggttattttaaatgcgttggcgggtaagccgctgcctgtttatggcaatggt
gctcaggtccgcgactggttgtatgtagaagaccacgccagagcgttgtatcaggtggtt
actgagggtgtggtgggtgaaacctacaatatcggcggccataatgagcgcaagaatatt
gaagtagttgaaaccatttgcgcgctattggatgagttggtgccagcaaaaccggcgggt
atcgcacactaccgtgatttgattacctacgtaaaagaccggccgggtcatgatatgcgc
tatgccattgatgctggcaagattgagcgggaactgggttggcgtccacaagaaaccttc
gaaagcggtatccgtaaaacggtcttgtggtatttgaataatgaatcttggtggcgtcgt
gttcaggatggctcttacgccggagagcgtttgggcttgagtgactaa
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