Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB0413
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Entry
YPTB0413 CDS
T00195
Symbol
frdA
Name
(GenBank) fumarate reductase flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Pathway
yps00020
Citrate cycle (TCA cycle)
yps00190
Oxidative phosphorylation
yps00620
Pyruvate metabolism
yps00650
Butanoate metabolism
yps00720
Other carbon fixation pathways
yps01100
Metabolic pathways
yps01110
Biosynthesis of secondary metabolites
yps01120
Microbial metabolism in diverse environments
yps01200
Carbon metabolism
yps02020
Two-component system
Module
yps_M00009
Citrate cycle (TCA cycle, Krebs cycle)
yps_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
yps_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YPTB0413 (frdA)
00620 Pyruvate metabolism
YPTB0413 (frdA)
00650 Butanoate metabolism
YPTB0413 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
YPTB0413 (frdA)
00720 Other carbon fixation pathways
YPTB0413 (frdA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YPTB0413 (frdA)
Enzymes [BR:
yps01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
YPTB0413 (frdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
Thi4
GIDA
FAD_oxidored
Lycopene_cycl
FabD_helical_ins
Motif
Other DBs
NCBI-ProteinID:
CAH19653
UniProt:
Q66FC7
LinkDB
All DBs
Position
complement(489976..491799)
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AA seq
607 aa
AA seq
DB search
MQTFNADLAIIGAGGAGLRAAIAAAEANPQLKIALISKVYPMRSHTVAAEGGSAAVTQDH
DTFDYHFHDTVAGGDWLCEQDVVDHFVHSCPEEMAQLEIWGCPWSRKEDGSVNVRRFGGM
KIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVDEGQARGVVAMNMMEGT
RVQIRANAVIMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGS
GILMTEGCRGEGGILVNKDGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR
AGRTVATPRGDVVYLDLRHLGEKKLLERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMG
GIETNPQCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAALRAMESGP
ANGSALDAQTRDVETRLSNLMKQEGTENWSKIRDEMGLSMEEGCGIYRTPELMQKTVDKL
AELKERFKRVKITDHSSVFNTDLLYTIELGYGLDVAECMAHSALNRKESRGAHQRLDEGC
TERDDVNFLKHTLAFHTPGGAPRIEYSDVKITKLVPAKRVYGGEATAQDAKDAKDAQDLK
DKEQAND
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaacctttaacgccgatcttgccattatcggggccggaggtgctggcttacgtgca
gcaatagccgcagcggaagccaacccccaactgaagattgctttgatctcgaaagtttac
ccaatgcgtagccataccgtggccgccgagggaggatcagctgccgtcacacaggaccac
gatacgtttgactatcatttccacgataccgttgcgggcggtgactggttatgcgaacaa
gatgttgttgaccattttgtccacagttgccccgaagaaatggcacagttagaaatttgg
ggctgcccatggagccgcaaagaggacggttcggttaacgttcgccgtttcggtggtatg
aagattgaacgtacatggtttgccgccgataaaaccggtttccacatgctgcacaccttg
ttccaaacctcccttaagtatccacaaattcagcgttttgatgagcatttcgtcctggat
attctggtagacgagggtcaggcacgtggtgtggttgccatgaatatgatggaaggcacc
cgcgtacaaatccgtgcgaacgccgtgatcatggccactgggggggctggccgggtttat
cgctataacaccaacggcggtattgttaccggtgatggtatggggatggcattccaccat
ggcgttccactgcgggatatggaatttgtacaatatcacccaacgggcttgccggggtct
ggcatcctgatgactgaaggctgccgtggtgaaggcggaattctggtgaataaagacggc
tatcgttacttgcaggattacggcatggggcctgaaacgccactcggtgagcctaaaaac
aagtacatggaattaggcccacgggataaagtctcgcaagcattctggcatgaatggcgc
gctggccgcacggtcgcgaccccacgtggcgatgtggtttatcttgatttacgccatctg
ggtgagaagaagctgcttgagcgcctgccgtttatttgcgaattggcaaaagcctatgtc
ggcgttgacccggttaaagagcccatccctgtacgcccaaccgcgcattacaccatgggc
ggcatcgaaaccaatccgcagtgtgaaacccgaatcaaaggcttgtttgcggtcggcgaa
tgctcttctgtaggcttgcacggcgctaaccgtttaggctccaattcattggctgaactg
gtggtatttggccgagtggccggtgaacaagccgctttacgcgcgatggaaagcggcccg
gcaaatggtagcgcactggatgcccagactcgtgatgtggagacccgtctgagcaatctg
atgaaacaggaaggaacagagaactggtctaagattcgcgatgaaatgggtctgtcgatg
gaagagggttgcggtatttaccgtacaccggaactgatgcagaaaacggtggataaactg
gccgagctgaaagaacgcttcaaacgtgtgaaaatcaccgatcactccagtgtatttaac
actgacctgctctacaccattgagctgggttatggtttggatgtggccgaatgtatggcg
cattctgcgctcaatcgtaaagaatctcgtggtgcccaccagcgtttggacgaaggctgt
accgaacgtgatgacgttaacttcctcaaacacaccttagccttccatacgccgggtggt
gcaccgcgcattgaatacagcgatgtgaaaatcaccaaactggtaccggccaagcgggtc
tatggtggcgaagccaccgcccaagacgcgaaagacgcaaaagatgcacaagatttaaag
gataaggagcaagcgaatgactga
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