Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB0833
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Entry
YPTB0833 CDS
T00195
Symbol
ffh
Name
(GenBank) 4.5S-RNP protein (ffh), GTP binding export factor, part of signal recognition particle with 4.5S RNA
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Pathway
yps02024
Quorum sensing
yps03060
Protein export
yps03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
YPTB0833 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
YPTB0833 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YPTB0833 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
yps02044
]
YPTB0833 (ffh)
Enzymes [BR:
yps01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
YPTB0833 (ffh)
Secretion system [BR:
yps02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
YPTB0833 (ffh)
Eukaryotic Sec-SRP protein
YPTB0833 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_30
AAA_31
AAA_24
KTI12
AAA_33
APS_kinase
YqeC
VirC1
AAA_14
T2SSE
Fe-ADH_2
AAA_16
AAA_19
DUF5407
ABC_tran
TsaE
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
CAH20073
UniProt:
Q66E60
LinkDB
All DBs
Position
1000719..1002080
Genome browser
AA seq
453 aa
AA seq
DB search
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKERAV
GHEVNKSLTPGQEFVKIVKNELISAMGEVNNELNLAAQPPAVVLMAGLQGAGKTTSVAKL
GKFLKEKQKKKVLVVSADVYRPAAIKQLETLAQGVGIDFFPSDAQEKPIDIVNRALQQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKSDALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRVQAEKLATKLKKGDGFDLNDFLDQLKQMRNMGGMASMLSKMPGAGQL
PENVKSQMDDKVTVRMEAIINSMTLKERAKPEIIKGSRKRRIATGSGVQVQDVNRLLKQF
DEMQRMMKKMKNGGLAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacttaactgatcgattgtcgcgcacactgcgcaatatcagcggccgtggc
cggctgacagaagaaaatattaaagaaacgctacgtgaagtgcgcatggcattacttgaa
gctgacgtcgctctgcccgttgttcgtgactttataaaccgagtaaaagagcgggctgtt
gggcatgaagttaataaaagtctgacgccaggccaagaattcgtcaaaatagttaaaaat
gaattgatcagcgccatgggcgaggtcaataacgaactgaatctggctgcacaaccgcca
gcagttgtgttaatggctggcttgcaaggtgcgggtaagaccaccagtgtagcgaaactg
gggaaatttcttaaagaaaaacagaagaaaaaagtgctggtcgtgtctgctgacgtttat
cgccctgcggcgatcaaacagttggaaaccctggctcagggtgttggcattgatttcttc
ccgtctgatgcacaggaaaaaccgattgatattgtgaatcgtgccctgcaacaggcaaag
cttaaattttatgatgttctgattgtcgataccgcaggtcgcttacacgttgatgaagcg
atgatggacgaaatcaaacaggttcatgcggcgattaagcctgttgaaaccttgtttgtc
gtcgatgcgatgaccggtcaggatgcggcgaatactgccaaagcattcaacgaagcactg
ccactcaccggtgtcgtgctgactaaagtggatggcgatgcgcgcggtggtgcggcttta
tctatccgccatatcaccggtaaacctattaaattccttggcgtcggtgagaaatctgat
gcactggaaccgttccatccagaccgaatagcctcacgtatcttgggtatgggcgatgtg
ctgtcgctgattgaagatatcgaaagcaaagttgaccgtgtgcaagcggagaaactggca
acaaaactgaaaaaaggcgatggtttcgatctcaatgacttcctcgaccagttgaagcag
atgcgcaacatgggggggatggccagtatgttgagtaaaatgccaggggcaggtcagttg
ccagaaaacgtaaaatcgcaaatggatgataaagtcacggtgcggatggaggcgatcatc
aattctatgacgctgaaagagcgcgctaaacctgaaattatcaaaggttcacgtaagcgc
cgtatcgcaaccggttctggtgtgcaggtacaggatgttaaccgtttgctgaaacagttt
gatgaaatgcagcgcatgatgaagaaaatgaaaaacggcggtttggccaaaatgatgcgt
ggcatgaaaggtatgatgccacccgggttcccaggtcgctaa
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