Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB1214
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Entry
YPTB1214 CDS
T00195
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Pathway
yps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YPTB1214 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yps03019
]
YPTB1214 (rhlE)
Enzymes [BR:
yps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YPTB1214 (rhlE)
Messenger RNA biogenesis [BR:
yps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
YPTB1214 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
AAA_22
Shikimate_DH
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAH20454
UniProt:
Q66D35
LinkDB
All DBs
Position
1447324..1448679
Genome browser
AA seq
451 aa
AA seq
DB search
MSFDSLGLNADILRAVEEQGYLVPTPIQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLSQDQQPIKGRRPVRALILTPTRELAAQIDENVQSYSKYLKLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKRELLSQMI
GEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCVDEHKLLRDI
ERLLKREIPRIALDGYEPDPSIKADPIQNGRQGRGAQRPGMGRGSSAGRPQNGGGAAGRG
DSRNSRPRSQADGQRRPAGPSSRGRSRNPGE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggcctaaacgccgacatcctgcgtgctgttgaagagcagggc
taccttgtgccgacgccaattcaacgtcaggcaatccctgtagtactggaaggccgcgat
ttgatggccagtgcgcaaacgggtacgggtaaaaccgctggtttcaccttgccgctattg
caactgcttagccaagatcaacaacccattaagggccgccgtccggtacgagcattgatt
ttgacgccaacccgtgagctggccgcgcagattgacgaaaacgtacagagttatagcaaa
tacctgaaacttcgctcactggtggtatttggtggcgttagcattaatccgcagatgatg
aaattgcgtggtggcgtcgatattttagtcgcgacacctggccgtttactggatctggaa
catcaaaacgcggttgatttgtccaaaattgaaattttagtattggacgaagctgaccgt
atgctggatatgggctttattcacgatatccgccgtgtattagccaaattaccggctaaa
cgtcagaatttgctgttctctgccaccttctctgatgagattaaagggctggccagcaaa
ttgttgcacaacccagcctctgttgaagtggctcgccgtaatacggcgtcagagcagatc
gcccaaagcgttcactttgtcgataaaaaccgtaagcgtgagctgttgtctcagatgatt
ggcgaaggtaactggcagcaagtgctggtgtttaaccgcactaagcacggcgcgaaccat
ttagctgaacagttaaataaagacggcattactgcggcggcaatccacggtaataaaagt
cagggcgcacgtactcgtgcactggccgattttaaagacggtaaaatccgtgtgttggtc
gcgacggatatcgctgcccgtggtctggatatcgaccagttacctcacgtggttaactat
gaattgccaaacgttccggaagattacgttcaccgaattggccgtactggccgcgcggaa
cggaccggggaagcgatttcactggtttgtgtcgatgaacataaactgctgcgtgatatt
gaacgtttattaaaacgtgaaattccacgtatcgcacttgatggctatgagccggatcca
agcattaaagctgatccaattcaaaatggccgtcagggccgtggtgcacaacgtccagga
atgggccgtggcagcagcgcgggtcgtccgcagaatgggggcggtgcagcaggtcgcggt
gatagccgcaacagccgcccacgcagccaggctgatggtcaacgccgtccggcaggccca
tcgtctcgcggtcgtagccgtaatccaggcgaataa
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