Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB1889
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Entry
YPTB1889 CDS
T00195
Symbol
lysA
Name
(GenBank) possible diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Pathway
yps00300
Lysine biosynthesis
yps00470
D-Amino acid metabolism
yps01100
Metabolic pathways
yps01110
Biosynthesis of secondary metabolites
yps01120
Microbial metabolism in diverse environments
yps01230
Biosynthesis of amino acids
Module
yps_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YPTB1889 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YPTB1889 (lysA)
Enzymes [BR:
yps01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
YPTB1889 (lysA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CAH21127
UniProt:
Q66B85
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All DBs
Position
2230727..2231893
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AA seq
388 aa
AA seq
DB search
MTLSTIDLFNLSENEDYVYILDLDAMTQFVREFRGIWDKQFPHVIFAYSFKSNNIASVTQ
LMFREGFSAEVVSLHELKLAINDGFFGTNIFFDGPVKLDNEIEFALSNNVNIQCDNITEI
ERVLALAANTNAEPHISLRLSSDYRGQGLSRFGMDKDEWNEAIALLTTHGILCNGIHVHS
GSNLSSCQGIVDTLESFQDEIGALKNHLRFIDIGGGYPASTCGSDTASILEQYSVKIALQ
LRRLGIDFHKTPLILEPGRALTEDFGYLVTRIVFAKCRYSTNVITTAVPGTNIRSAQYHN
HRKVLIIPERPVNCEHSVADVYGSNCYENDIIAKNVPVPFDLSLDDKIAIFSCGAYDIMN
SSDWIRKRPPIIVISNGKTYYEHYRFAG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgacactgtcgacgatagatttatttaatctcagtgaaaacgaagattatgtttatatt
ctagatcttgacgcgatgactcagttcgttcgcgaatttagagggatatgggataaacaa
ttccctcacgtaatttttgcctattcgtttaaaagtaataatattgcttccgtcacacaa
ctgatgtttagagagggtttttctgctgaagttgtctctctgcatgaattaaagcttgcg
attaatgatggattttttggaaccaatattttttttgatggcccggttaaattggataac
gagattgagtttgcgctatcaaataacgttaatattcagtgtgataatataactgaaata
gaaagagtattagcgcttgctgctaacactaatgctgaacctcacatttcattacgccta
agttccgactatcgtggccaaggactatcgcgcttcggtatggataaagacgagtggaat
gaggccatcgctttactcactactcatggcattttgtgcaacgggattcatgtccattct
ggatctaatcttagttcatgccagggtattgttgacacgcttgagtcttttcaagatgaa
ataggtgctctcaaaaaccatcttcgtttcattgatatcggtggaggctaccctgcatca
acttgtggttctgatacagcatcaatccttgaacaatattcggtcaagatagctttacag
ctacggaggttaggaattgattttcacaagaccccccttatactggagcctggccgtgca
ttaacagaagattttggctatctagtgactagaatcgtttttgcaaaatgtcgttattcc
actaatgtgatcaccaccgcggtgcccggaacaaacataaggtctgctcagtatcacaac
catcgtaaggtattgattattccagaacgccctgttaattgtgaacacagcgttgcagat
gtttacggttcaaactgctatgaaaacgatatcattgcaaaaaatgtaccggtcccgttt
gacctttcactcgatgataaaatagctattttttcctgtggtgcttatgacatcatgaat
tctagtgactggattcggaaacgaccgccaataatcgtaatttcgaacggtaagacttac
tatgaacattaccgatttgccgggtga
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