Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB2094
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Entry
YPTB2094 CDS
T00195
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Pathway
yps03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YPTB2094 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yps03400
]
YPTB2094 (xthA)
Enzymes [BR:
yps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
YPTB2094 (xthA)
DNA repair and recombination proteins [BR:
yps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
YPTB2094 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
CAH21332
UniProt:
Q66AN6
LinkDB
All DBs
Position
complement(2465079..2465885)
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AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYHGQK
GHYGVALLTKEQPLAVRRGFPSDEEDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPI
KFPAKARFYADLQRYLEEQLSPEAQVLIMGDLNISPTDLDIGIGEDNRKRWLRTGKCSFL
PEEREWLERLQNWGLVDTFRAANPDCNDHFSWFDYRSRGFDENRGLRIDLLLASQPLAAR
CIATGIDYAIRGMEKPSDHAPVWSEFSL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgtttcttttaatatcaatggcctacgtgctcgtcctcatcaattagccgca
ataattgagcagcatcaaccggatgtgatcggcctacaagaaactaaggtacatgatgat
atgtttcctcttgaagacgtcagccagcatggttaccacgttttttaccatgggcaaaaa
ggtcattacggtgttgcactattgacgaaagaacagccactggctgtgcgccgaggtttc
ccaagcgatgaagaagatgcacagcgccgtattatcatggccgacttagccaccccgcaa
ggcaccttaacggtaatcaatggttattttcctcagggagaaagtcgtgaccatccaata
aagttccccgctaaagcgcgcttttatgctgacctgcaacgctatcttgaggagcaactc
tcccctgaggcccaggtacttatcatgggggacttgaatatcagtccaaccgatttagat
atcggtattggtgaagataaccgtaaacgctggctgcgcacaggcaaatgctcgttctta
ccagaagaacgagagtggctggaacgtctgcaaaactgggggttggttgatactttccgc
gcggctaatcctgattgtaatgaccatttttcatggtttgattaccgttcccgtggtttt
gatgaaaacagaggccttcgcatcgatttattgctggccagtcaaccactggcggctcgt
tgtattgctacaggtattgattatgcaatccgtgggatggaaaaaccatcagaccacgcg
ccggtttggtccgaattctcactttaa
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