Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB2890
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Entry
YPTB2890 CDS
T00195
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Pathway
yps03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YPTB2890 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yps03019
]
YPTB2890 (rnc)
03009 Ribosome biogenesis [BR:
yps03009
]
YPTB2890 (rnc)
03036 Chromosome and associated proteins [BR:
yps03036
]
YPTB2890 (rnc)
Enzymes [BR:
yps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
YPTB2890 (rnc)
Messenger RNA biogenesis [BR:
yps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YPTB2890 (rnc)
Ribosome biogenesis [BR:
yps03009
]
Eukaryotic type
90S particles
RNase
YPTB2890 (rnc)
Prokaryotic type
rRNA processing factors
YPTB2890 (rnc)
Chromosome and associated proteins [BR:
yps03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
YPTB2890 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
CAH22128
UniProt:
Q667V1
LinkDB
All DBs
Position
complement(3420245..3420925)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFQQQELLLQALTHRSASSKHNERLEFLGDSILSFVIANELYRRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIHTIERLILEWYHSRLEEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLNEPVIGTGSSRRKAEQAAAEQALKQLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatcgtaataaacaggctgcagcggaagctgggctacactttccaacagcag
gagctcttgctgcaagcactgactcatcgtagcgccagcagcaaacacaatgagcgtttg
gagttcctgggtgactctatattaagttttgttatcgccaatgagctatatcgccgtttc
cctcgcgttgatgaaggggatatgagtcgtatgcgggccacattggttagagggaataca
cttgccgaaatggcccgtgaatttgaccttggcgaatgtttacgccttgggccgggtgaa
ttgaagagtggtggttttcgccgcgaatcaattttagccgatacggtagaagccttaatt
ggcggtgtattcttagatagcgatatccatacgattgaacggctgatcctcgagtggtat
cacagtcggttagaggaaatcagccctggtgataagcagaaagacccaaaaacgcgcttg
caagagtatttgcagggccgtcatctgccattaccttcatatctggtcgtgcaggttcgc
ggcgaagcacatgaccaggaatttactatccactgccaggtgagtggcttgaatgaacca
gtaataggtactggctcaagccgtcgtaaagctgagcaggcggcagcggaacaagcgctg
aaacagttggagcttgaatga
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integrated database retrieval system
