Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB3561
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Entry
YPTB3561 CDS
T00195
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yps03019
]
YPTB3561 (cafA)
03009 Ribosome biogenesis [BR:
yps03009
]
YPTB3561 (cafA)
Messenger RNA biogenesis [BR:
yps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YPTB3561 (cafA)
Ribosome biogenesis [BR:
yps03009
]
Prokaryotic type
rRNA processing factors
YPTB3561 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CAH22799
UniProt:
Q665F7
LinkDB
All DBs
Position
complement(4239530..4240999)
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AA seq
489 aa
AA seq
DB search
MTAELLVNITPSETRVAYIDGGILQEIHIEREAKRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGDEQKNFNVRDIAELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVLMPGAAHVGVSQRIESEAERERLKKTVAAYCDEQGGFIIRTAAEGIGEE
ELSADAAFLKRLWTKVQERKKRNITKYKLYGEMALAQRVLRDFAGAALDKIRVDSKLTYD
LLVEFTREYIPEMTDKLELYTGKQPIFDLYDVENEIQRSLERKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLEETIFNTNIEATQAIARQLRMRNLGGIIIIDFIDMSNEDHRRRV
LHSLEQALSKDRVKTSINGFSQLGLVEMTRKRTRESIEHVLCHECPTCRGRGTVKSVETV
CYEILREIVRVHHAYDSDRFLVYASPAVGEALKGEESHALAEVEIFVGKQVKVQIEPLYN
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaattactggtcaatattacaccgtctgaaacgcgtgttgcttatattgat
ggcggcatcctgcaagaaatacatatcgagcgtgaagccaaaagagggatcgttggcaat
atttataaagggcgagtcagccgggttttaccgggtatgcaagctgcttttgttgacata
ggtctggataaagccgccttcctccatgcttccgatatcatgccccacaccgaatgcgtg
gccggggatgaacagaaaaacttcaatgtgcgcgatatcgccgaactggtccgtcagggg
caggatttaatggtacaagtggtgaaagatcccttgggtaccaaaggcgcacgtttgaca
accgatattactcttccttctcgctatctggtgttaatgcccggagctgcccatgttggg
gtttcccagcggattgaaagtgaagcagagcgcgaacgcctaaaaaagacggtggcagct
tactgtgatgagcagggcggttttattattcgtactgccgctgaagggattggcgaagaa
gagctatccgccgatgccgcgttccttaaacgtttgtggaccaaagttcaggagcgtaag
aagcgtaatatcaccaaatataagctgtatggtgaaatggcgctggcgcaacgcgtattg
cgtgattttgctggtgcggcgctggataaaatccgcgttgactcaaaattgacttacgat
ttgctggtggagttcacccgcgaatatattccagaaatgacggacaagctggagctgtat
actgggaagcaacctattttcgatctctatgatgtcgagaatgaaattcagcgctctctg
gagcgtaaagttgaattaaaatcaggtggttatctgattatcgatcagacagaagcgatg
actaccgtggatattaacactggggcatttgtcgggcatcggaatcttgaggaaaccatt
ttcaataccaatattgaggcgacgcaggccattgcccgccaattgcggatgcgtaatctg
ggcgggattatcattattgatttcattgatatgagtaatgaagatcatcgccggcgggta
ttgcattcattggaacaagcactgagtaaagatcgcgtaaaaaccagtattaacggcttc
tcccagctaggcttagtcgaaatgacgcgtaagcgtacgcgtgaaagtattgagcatgtt
ttatgccatgaatgcccaacctgccgtggccgtggcacggtaaaatccgtagagaccgtg
tgctacgaaatcttgcgtgaaattgtccgtgttcatcatgcttatgattctgaccgtttc
ttggtctatgcttctccggctgtaggtgaggcgctgaaaggcgaagagtctcatgcactg
gccgaggtggaaatcttcgtcggtaagcaggtaaaagttcaaatagagccactgtataac
caagaacagtttgacgtggtgatgatgtaa
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