Yersinia pseudotuberculosis IP 32953 (serotype I): pYptb0031
Help
Entry
pYptb0031 CDS
T00195
Symbol
topB
Name
(GenBank) DNA topoisomerase III family
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yps03032
]
pYptb0031 (topB)
Enzymes [BR:
yps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
pYptb0031 (topB)
DNA replication proteins [BR:
yps03032
]
Prokaryotic type
DNA Topoisomerases
pYptb0031 (topB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
DUF3945
Zn_ribbon_PADR1
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
CAF25473
UniProt:
Q663C4
LinkDB
All DBs
Position
pYptb32953:21070..23232
Genome browser
AA seq
720 aa
AA seq
DB search
MRVFIAEKPALAKVIADALGAGVRKDGYIQCGSDVVTWCVGHILELSPPEAHNPAYAKWN
AADLPLKLRPAKYQPKTTTAAQFKVVQQLVGQATEIVHAGDPDDEGQLLVDEVLTYCDNT
SPVKRVLINDLNTAAAKKALANLRDNREFLGLSQKALARSIGDQLYGFNMTRAYTLAAQQ
KGVQGVLSVGRVQTPILGLIVNRFNTFQNHSAAFFYNLSANIDVIGHRIVPRYQVPEGAP
VDDKGRLIDETVANDVATACKGQPATVTASQTEEKSTPAPLPFSLLDLQAHMSKKHGLSA
QQTQDVTQSLRENHKAITYNRSDCNYLTSEQFGDACATLAAIASALPVLAVSLSEANPAQ
KGRAFDDKKVSAHTAIIPTTTAPNPASMTVNERQVYHAIAAQYLAQFLPEKRYLAASATF
AVNGHIFIAKATQTTQDGWTTLLSGTEDNEGESNDEFETSPFAALSALSNSDEGVCESVT
VSKEKTKPLPLYTEATLLKDLQRVAKYVKDPKIRQLLKDRDAGKTGEHGGIGTPATRASM
LETLQKRGFYTVEKKKLIPTELGLSFIASLPEIATAPDMTALWHEQQQMIEQGSFTVDEF
LDALEDFIAGQMNNVDLSGMADGVPQTQSSQRPRLTAVCPKCNGAVVISAKVYACSGCEL
KVWGEVASKKLTLPQVETLFSKGKTAVLKGFKSKAGKPFDAKLVLDTATGKVSFEFENKK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgagagtatttatcgctgaaaaaccagcgctggcaaaagtgatcgccgatgcattaggt
gcaggtgtgcgtaaagacggttatatccaatgtggaagtgacgttgtgacatggtgtgtc
gggcatattctcgaactgtctccccccgaggcacataatccagcgtatgcgaaatggaat
gctgccgacctgccgttaaaattacgccctgcgaaataccaacccaaaactaccacggcg
gcacaatttaaagtcgtgcagcagctcgtcgggcaagctaccgaaattgtccatgcgggt
gaccctgatgatgagggccagctcttagttgatgaagtgctaacctactgcgataacacc
agccccgtgaaacgggtactgattaacgatctcaacacggcggcggcgaaaaaagcactg
gcgaacctgcgcgataatcgcgagtttttgggcctgtcacaaaaagcgctggcgcggagt
attggcgatcagttgtacggtttcaatatgacccgggcctatacgctggcagcacagcaa
aaaggcgtacagggtgtgttgtctgtagggcgggtgcaaacgcccattctcggtctgata
gtcaaccgatttaatacgttccagaaccacagcgcggcctttttctacaacctgagcgcc
aatattgacgtgatcggacaccgaattgttccccgttatcaggtgccagaaggcgcacca
gtagatgacaagggacgattgattgatgaaaccgtggcaaatgacgttgccaccgcctgt
aagggccaaccggcgacagtcaccgccagccagaccgaggaaaagagcacccctgccccg
ctgccgttttcgttgctggacttgcaagcccacatgagtaaaaaacacgggctgtcggca
caacagacgcaggatgtgactcaatcgctgcgtgaaaaccacaaagctatcacttacaac
cgctctgattgcaactatttgaccagtgagcagtttggggatgcctgcgcgacactggcg
gctatcgctagcgcgttgccagtattggcggtaagtttgagtgaggccaatcccgcacag
aaaggccgtgcgtttgatgacaaaaaagtgtcggcccataccgctattattccgaccacc
acggcccccaatcctgccagcatgacggtaaacgagcgtcaggtgtatcatgccattgcc
gcgcaatatctggcgcaattcctgcctgaaaaacgttaccttgccgccagtgcgactttt
gctgtcaacggccatatatttatagcaaaggcgactcaaaccacgcaggacggctggaca
actcttttatcagggacagaggacaacgagggcgagagcaatgacgagtttgaaacatcc
ccgtttgcggcgctgtcagccctaagtaattcagatgagggagtgtgtgaatcggtcact
gtgagcaaagaaaaaaccaaaccgttaccgctatataccgaagccacgttattaaaggat
ttgcagcgtgttgcgaaatacgtcaaggacccgaaaatccgccagttgctcaaagaccgt
gacgccggaaaaacgggtgaacacggcggcattggtacacctgcgacccgcgccagtatg
ttggaaacgttgcaaaagcgcggattctacacagtcgagaagaaaaaactcattccaacc
gaattagggttgagttttatcgccagcttgccagaaattgctactgcgcccgatatgacg
gctctatggcatgagcaacagcaaatgattgagcaaggcagttttaccgtcgatgagttt
ttggacgcactcgaggactttatagccggtcagatgaacaacgtggatttgagcggaatg
gcagacggtgtaccccaaacgcaaagtagccagaggccaaggttgacggcggtctgtcca
aaatgtaacggggcagtggtgatttccgccaaggtttacgcttgtagcgggtgtgaactg
aaagtgtggggcgaagttgccagcaagaaattgacattaccgcaggtagaaaccttgttc
agcaaagggaaaactgccgtattgaaaggctttaaaagtaaagcgggtaagccttttgat
gcaaagttggtgctggataccgcgacaggtaaggttagctttgagtttgagaacaaaaag
tag
DBGET
integrated database retrieval system
