Yersinia pestis A1122: A1122_07165
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Entry
A1122_07165 CDS
T01831
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ypt
Yersinia pestis A1122
Pathway
ypt00730
Thiamine metabolism
ypt01100
Metabolic pathways
ypt01240
Biosynthesis of cofactors
Module
ypt_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ypt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
A1122_07165
Enzymes [BR:
ypt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
A1122_07165
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AEL72088
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Position
complement(1569205..1571250)
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AA seq
681 aa
AA seq
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MSNNTTSLPAENSSHPRKGTPIRKKQREEAQQFINTLQGVTFPNSQRIYLQGSRPDIQVP
MREIQLSPTQIGGSKNEPRYEDNEAIPVYDTSGPYGDPQAKLDVHNGLPKLRAAWVADRQ
DTEALASVSSGFTQQRLADEGLDHLRFEHLPRPRKAATGQCVTQLHYARQGKITPEMEFI
ALRENMGRERIRGEVLLQQHPGQAFGAHLPENITAEFVRQEVAAGRAIIPANINHPESEP
MIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILR
NSPVPIGTVPIYQALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTLHAGVLLRYVPMTA
KRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICQICAAYDVSLSLGDGLRPGSIQDAN
DEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPL
TTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAAD
LAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPATARAYHDETLPQESGKVAHFCSMCG
PKFCSMKISQEVRDYAAAQEQAAAQAQAATPTTAAQPIDITQPINMLQSGMEKMSAEFRS
RGSELYHRPANLSAEANNEPT
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatacaacgtcattacccgctgaaaattcgtcacacccacgtaaaggcaca
cctattcgtaaaaagcagcgcgaagaggcccaacagtttattaataccttacaaggcgtt
acttttcccaactcccaacgtatttatctacaaggctctcggcccgatattcaagtgccg
atgcgtgaaatccaactcagcccgacgcaaatcggcggcagtaaaaacgaaccacgctat
gaagataatgaggccatcccggtctatgacacctccggtccctatggtgacccacaagct
aaactggatgttcataacgggctgcctaaactgcgtgccgcttgggtcgcagatcgccaa
gatactgaagcgctggcatctgtcagttccggctttacccaacagcgtttggctgatgaa
ggcctggaccatttacgttttgagcatctaccccgcccacggaaagcagccactggtcaa
tgtgtgactcagttgcattacgcccgacaggggaaaatcacgccagagatggagtttatc
gccctacgggaaaatatgggccgtgaacgtattcggggtgaagtcttgcttcaacaacat
ccgggacaagcgtttggtgcccatctgccggaaaatatcaccgccgagtttgtgcgtcag
gaagtggcggccggccgagccatcatccccgccaatattaatcacccagaatctgaacca
atgattattggccgtaattttctggtcaaagtgaatgccaacatcggtaattccgccgtg
acctcttccattgaagaagaggtagaaaaactggtctggtctacccgttggggtgccgat
acggtgatggacttatctacgggccgctatattcatgaaacgcgggaatggatcctacgt
aacagcccggtccctattggcacggtacctatctatcaggcgctggaaaaagttaatggc
gtggccgaaaatctgacctgggaaatgttccgtgacaccctgttagagcaggcagagcaa
ggggtagactattttactctccacgcgggggtcttgttgcgctatgtgccgatgactgcc
aaacgcctaaccggtatcgtctctcgcggcggttcaattatggcaaaatggtgcctttcg
catcatcaggaaaacttcctgtatcagcatttccgcgaaatctgtcagatttgtgcagcc
tatgacgtttcattatcactgggcgatggcctgcgccctggctctattcaagatgccaat
gatgaggcccaattcgccgaactgcataccttgggtgaattgaccaaaatcgcctgggag
tatgatgtacaggtgatgatcgaaggcccagggcatgtgccgatgcagatgatccgccgc
aatatgaccgaggaactggaacactgccacgaagcgccattttataccttaggcccactg
accacggacatcgcaccgggctatgaccactttacctcagggattggtgcagcgatgatc
ggctggttcggttgcgccatgctctgttatgtcacccccaaagagcaccttggtctgccg
aataaagaggatgtcaaacaggggcttattacttacaaaattgccgcgcacgccgcagat
ttggctaaaggccaccccggtgcgcaaattcgtgataacgccatgtccaaagctcgcttt
gagttccgctgggaagatcaattcaatttggcgcttgatccagcaacagcccgcgcttac
cacgatgaaaccttgccgcaagagtccgggaaagtcgctcatttttgttccatgtgcggc
ccgaaattctgttcaatgaaaatctcacaagaggtccgcgattatgctgcggcacaagaa
caagcggccgcacaagcacaagccgctacaccaaccaccgcagcacaaccaatagacatc
acgcagccaattaatatgctgcaatcagggatggaaaaaatgtcggccgagtttcgctcc
cgtggcagtgagctataccaccgcccggcgaatctgagtgcggaggccaataatgagcca
acttga
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