Yersinia pestis A1122: A1122_19180
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Entry
A1122_19180 CDS
T01831
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
ypt
Yersinia pestis A1122
Brite
KEGG Orthology (KO) [BR:
ypt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ypt01002
]
A1122_19180
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypt01011
]
A1122_19180
Peptidases and inhibitors [BR:
ypt01002
]
Cysteine peptidases
Family C82
A1122_19180
Peptidoglycan biosynthesis and degradation proteins [BR:
ypt01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
A1122_19180
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AEL74450
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Position
4127811..4129667
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AA seq
618 aa
AA seq
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MSMIKRKLQRALVLYCALVCSLMTVFTASAAAPVMPVDSSSALPARGATMSVAQSRSQLL
AALPKDVVPLYAAELASLYAANQMQPMWQDRVAVQRFQQQLAEVGLSGIQPQFMQWVKWL
SEPEITGMARDIILSDAMLGYLHFISGVGANGSVWLYSNVPYKMAMPPAAVLNAWQKAVN
EGSTASYLASLAPQHPQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQLSDDIPALREIL
DRTGMLHPTTPVKAPEVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVSPSAVSVPESDD
AAPAPMPPVSVVTLTDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATL
LALNIQRLRILPGHVDNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNN
VVVNPPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPN
NFPYRLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDL
ANMLLQDAGWNDARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYD
KMVRSGAQISQQAEFLLQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgataaaaagaaagttacaacgcgcactcgttttatactgcgctttagtttgc
agcctgatgaccgtgtttactgcatcagccgctgctcccgtaatgcccgtggattcatct
tcagctttgccagcacgtggtgcaaccatgtccgtggctcaaagtcgttcgcaattattg
gccgcgcttccaaaagatgtcgtgccactctatgccgcggaattagcgtcattatatgcg
gcgaaccaaatgcagcctatgtggcaagaccgggttgctgttcaacgttttcagcaacag
ttagcggaggttgggctttcaggcattcaaccgcagtttatgcaatgggttaaatggttg
agcgagccagaaatcaccggtatggcgcgtgatattattctatcggatgcgatgctgggt
tatttacactttatttccggtgtcggtgctaatggcagtgtttggttatacagtaatgtg
ccttacaaaatggccatgccgcctgcagcagttttaaacgcctggcagaaagcggtcaat
gaaggctcgacagcctcttatctggcgtcgttggctccgcagcatccgcaatacgataaa
atgcaacaggcgttgaagttgatgctagcagaccgacgcccgtggccacagatgcctact
gggccaagtttacggccggggcaacttagcgacgatatccctgcattgcgggaaatcctt
gaccgaacgggtatgttgcacccaacaacccccgtgaaagcgccagaggtgatccctgtg
gagaaccctacggtggccgtcgttaatgacgatctctctgttgatgaagaaaaaaatcgg
actcagaccaacagcttggtggtcagcccatcagccgtctctgtccctgagagcgatgat
gcggcacccgcaccgatgcctcccgtgagcgtggtcacgttaactgacaatatctatact
cctgagttggtagaagccgttaaacgcttccagcaatggcaggggctcactgatgacggt
gttatcggcccccgtacccgcgaatggttgaatgtctcgccacaaacgcgggccacgtta
ttggcattgaatatccagcgattacgtattttgccggggcatgttgataacgggattatg
gttaatatcccaaattattctctgaattattataaagatggggccgaagtgctttcatct
cgggtgattgttggccgtccaagtcgtaaaacgcccctgatgagtagtgcgttgaataat
gtggtggtgaacccgccgtggaacgtgccgacctcattggtacggcaggatatcgtgccc
aaagcacgtaacgatgccgggtattttcagcgtaatggctataccgtgttgtccggatgg
agtaatgatgctgaagtgatcaatccttcaatgattgactggagtattatctcgccgaat
aacttcccttaccgtttgcgtcaggcaccaggtgctaataactcgttagggcggttcaaa
tttaacatgccaagttctgatgctatctatttacatgacacgccgaatcatggcctgttc
caaaaggacattcgcgccctgagttcaggttgtgtccgtgtcaataaagcgtctgattta
gcgaacatgctgctgcaagatgctggctggaatgatgcacgggtctcttccaaggtaaaa
caaggtgataccacctacgtcaatatccgccagcgcgttccggtgcaattgtattatctg
acagcatgggttgcggaagacggtaaaccgcagtttagaacagatatttacaattatgat
aaaatggtgcgatctggtgcacaaatctcacagcaggctgagtttttattgcaataa
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