Yersinia pestis A1122: A1122_20235
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Entry
A1122_20235 CDS
T01831
Name
(GenBank) putative DEAD box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
ypt
Yersinia pestis A1122
Brite
KEGG Orthology (KO) [BR:
ypt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypt03400
]
A1122_20235
DNA repair and recombination proteins [BR:
ypt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
A1122_20235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
DUF7577
SWI2_SNF2
Zn_ribbon_3
zf-tcix
AAA_30
AAA_22
Zn_Ribbon_1
AAA_16
SLFN-g3_helicase
DZR
AAA
Motif
Other DBs
NCBI-ProteinID:
AEL74658
LinkDB
All DBs
Position
complement(4343293..4345050)
Genome browser
AA seq
585 aa
AA seq
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MAFTLRPYQREAVDATVAYFRRHTTPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQRQSEGKVVFGSVQSVARNLPLFDSAFSLLIIDECH
RISDEDDSQYQQIIQHLRTGNPQLRLLGLTATPYRLGKGWIYQFHYHGITRGDEKALFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGLFREADLDRELKQQQRITPH
IVSQIIEYAAQRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPTERDALINAFKQQQ
LRYLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLFPGKEDCLILDYAGNP
HDLFTPEVGTSKPHSGSQPVQVFCPDCGFANIFWGKCTESGEIIEHYGRRCQGWFEDDQG
ARAQCDYRFRFKSCPHCGAENDIAARRCHQCQAVLVDPDDMLKAALKLKDALVLRCGGMQ
LETGQDAKGEWLKATYYDEDGTNTSERFRLTTPAQRMAFEQIFLRPHQRAPGIALKWHTA
ADIIAQQALLRYPDFVVARRRGQWWQIREKVFDYKGRFRRADALA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcacactacggccttatcaacgagaagcggtcgatgccacggtggcttatttt
cgacgccacaccacacccgcactcattgttctaccaaccggcgcaggcaagagtttagtg
atcgcagaacttgcgaaactggcccgtggccgtgtgttggtattagcgcatgtcaaagag
ttggtagcacagaatcacgcaaaatactgcgcatacggtcttgaggccgatatctttgcc
gccgggttgcaacagcgacaaagcgagggaaaagtggtctttggcagcgtgcaatcggtg
gcccgtaatctgccgctatttgatagcgcattttctctgctgattatcgatgaatgtcat
cgtatcagcgatgaagatgacagccagtatcagcaaatcattcagcatttacgcacgggg
aatccgcagttacggctgttggggctgacggccaccccttatcggctggggaaaggctgg
atttatcagttccactatcacggtattactcgtggtgatgaaaaagccctgttccgtgac
tgtatttatgaattaccgctgcgttatatgattaaacatggctttctggtgccacctgaa
cggctggacatgccggtcgtacagtatgatttcagccgcctgaccagcaacagtgatggc
ttgttccgtgaggcagatttagatcgagaacttaagcaacaacaaagaattaccccacat
attgttagccaaataatcgaatatgcggctcagcgtcgcggtgtgatgatttttgccgcc
accgtagagcacgccaaagaagtctatggcctgttgcccaaaggtgaagccgcgttggtc
agcgcggggaccccacctacggaacgggatgcgctgatcaatgcctttaaacagcaacaa
ttgcgctatttggtcaatgtgtcggtactgaccaccggttttgatgccccccatgtggat
ctgattgccattcttcgtccaaccgaatccatcagtttatatcaacaaattgttggccga
ggcctgcggctgtttcccggtaaagaggattgcttgattctggattatgcgggtaatccc
catgaccttttcacgccagaagtgggcacgagcaaacctcacagcgggagccaaccagta
caagtcttctgccccgattgtggttttgccaatatcttctgggggaaatgcactgagtcc
ggcgaaataattgagcactatggccgccgctgtcagggctggtttgaggatgatcagggt
gcacgtgcgcaatgtgactaccgttttcgctttaaatcctgcccacattgcggagcagaa
aatgatattgccgcccgtcgctgccatcaatgccaggcggttttggtcgatcccgacgat
atgctgaaagccgccctgaaactgaaagatgcgctggtattgcgctgtggcggtatgcag
ctagaaacgggccaagacgccaaaggcgagtggctgaaagcgacctattacgatgaggat
ggcaccaataccagtgagcgcttccgattaaccacacctgcacaacgtatggcattcgaa
cagatattcctgcgccctcaccagcgcgcaccgggcattgccctaaaatggcacaccgcc
gctgatattatcgcgcagcaggcgttgctacgttatccggattttgtggtcgcccgccgt
cgggggcagtggtggcaaatcagggagaaggtatttgattacaaggggcgttttcggcgg
gccgatgcccttgcctga
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