Yersinia pestis A1122: A1122_20915
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Entry
A1122_20915 CDS
T01831
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ypt
Yersinia pestis A1122
Pathway
ypt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A1122_20915 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypt03400
]
A1122_20915 (recD)
Enzymes [BR:
ypt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A1122_20915 (recD)
DNA repair and recombination proteins [BR:
ypt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A1122_20915 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
AAA_11
SH3_13
UvrD-helicase
AAA_22
AAA_16
PhoH
SLFN-g3_helicase
nSTAND3
CbiA
AAA_28
UvrD_C
T2SSE
MukB
TrwB_AAD_bind
FtsK_SpoIIIE
AAA_33
AAA
Flavi_DEAD
MeaB
SRP54
Motif
Other DBs
NCBI-ProteinID:
AEL74794
LinkDB
All DBs
Position
complement(4497430..4499385)
Genome browser
AA seq
651 aa
AA seq
DB search
MTLLAQAARDRLLRPLDVQFSRMIAGDDDPRLQLAAAILSAEVGAGHVCLPLRYLQPELL
FGGRQPDLSLALWQAAGSPDKAQWLQALQNAPVVSDGSQPTPLVLQQERLYLQRMWQYEG
DVVQFIASDSVFINRDSDFMTSKGIATSVDESLLRETLDALFGCAGSEVDWQKVAAAVAA
TRRISVISGGPGTGKTTTVAKLLTALIRLSQGQRLRIKLAAPTGKAAARLTESLGKAIRQ
FFLTDDERKLFPDQASTLHRLLGVQPNSQRLRYHRGNPLNLDVLVVDEASMVDLPMMARL
IAALPAKAKVIFLGDRDQLASVEAGAVLGDICRFAELGYSEQRAQQLTQLTGYLLTNNAL
TSNVLTNKALANKAQPDETYSDSANVRDSLCLLRKSYRFDEKSGIGQLALAVNAGEYRQA
LSVLNSAYSDVERFPLADEEDYQVLLEACAVGYQHYLERVAALAPAAEVLAAFGRYQLLC
ALRSGPFGVSGLNERIEQVLHRKGFIIRPSGPSGRWYVGRPVMIELNDSALGLFNGDIGI
ALHDNEGELRVYFQLPDGNIKSVQPSRLPSHETAYAMTVHKSQGSEFEHTALVLPNTFMP
VLTRELVYTAITRARQHLTLYCSDAVLSHAIRTPTLRLSGLVDRLNTLNRQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgacgctattggctcaggctgctcgagaccgcttattgcgcccactggatgtgcagttt
tcacgaatgattgccggcgatgatgacccgcgattacaactggccgcagcgatccttagt
gcagaagtaggggccggtcatgtttgcctgccattacgctatttacagccagaactgcta
ttcggtgggcggcaacccgatttatcactggcgctatggcaggcggcgggctcgccagat
aaagcacagtggctacaggcattacaaaacgccccagtagtcagtgatggctctcaacca
acaccattagtgctacagcaggaacgtttatatctgcaacgaatgtggcagtacgaagga
gatgtcgtccaatttattgccagtgactctgtttttataaacagagatagtgattttatg
accagtaaaggtattgccacttctgttgatgaatcgctattacgggagacgctagacgct
ttgtttggttgtgctggtagtgaggttgattggcaaaaagtggcggcagcggttgcggct
acccgtagaatttcagttatttccggcgggccgggcacggggaaaaccaccacagtagcc
aaacttttgacagcattgatacggcttagccaggggcaacgtttacgtattaaacttgcg
gccccaaccggtaaagccgctgcacgccttactgaatcactgggcaaagcgattcggcaa
ttctttcttactgatgatgaacgtaaattattccctgatcaggcttcgaccttgcaccgt
ttactgggtgttcagcccaatagccagcgcctgcgttaccaccgtggtaatccattaaat
cttgatgtactggtcgttgatgaagcatcaatggttgatttacctatgatggcgcgctta
attgcggcattacctgccaaggccaaggtgatattccttggtgaccgtgaccaactggcc
tcggttgaggcgggggcggttctgggggatatctgccgttttgccgaattaggttacagc
gagcaacgggcacagcaattaactcagttaacgggctatttattaactaataatgcatta
accagcaatgtactaaccaataaggcattagccaataaagcgcagccagatgaaacctat
tctgattcagcgaatgtacgcgatagcctgtgtttactgcgtaaaagttaccgcttcgat
gaaaagtcagggattgggcagcttgctctggccgttaatgcaggggagtatcggcaggct
ttatccgtattaaacagtgcgtattctgatgttgaacgcttcccgctggccgatgaggaa
gattatcaggtactgctagaggcttgtgctgtggggtatcagcattacctcgaacgggtg
gctgcgttagcccctgcggcagaggtattggcagcatttggccgctaccaactgctgtgt
gcattacgttccgggccattcggtgtcagtggcttaaacgaacgcattgaacaggtttta
catcgtaaaggattcattatccgtccatcagggccttctggccgttggtatgttgggcgg
ccagtgatgatagaacttaatgatagcgcacttggcttattcaacggggatattggtatt
gccttacatgataatgaaggcgagctacgggtatattttcaattgcccgatggcaatata
aagtcagtacaacctagtcgccttcccagccatgaaaccgcttatgctatgacggttcat
aaatcgcagggttcagagtttgaacacacagcattggtattacctaacacgttcatgccc
gtgttaactcgtgaattggtctataccgccattacccgcgcccgtcagcatctgacgctt
tattgcagcgatgccgtgctaagtcatgccatacgtacaccgactctccggctgagtggg
ctagttgatcgcttgaatacattaaatcgccaataa
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