Yersinia pestis Shasta: BZ15_2828
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Entry
BZ15_2828 CDS
T03718
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
ypv
Yersinia pestis Shasta
Pathway
ypv02020
Two-component system
ypv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ypv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BZ15_2828
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BZ15_2828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ypv03021
]
BZ15_2828
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ypv02035
]
BZ15_2828
Transcription machinery [BR:
ypv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BZ15_2828
Bacterial motility proteins [BR:
ypv02035
]
Flagellar system
Flagellar assembly proteins
Stator
BZ15_2828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_38
UPF0122
HTH_Tnp_ISL3
HTH_23
MarR_2
UPF0175
DUF4143
GerE
Motif
Other DBs
NCBI-ProteinID:
AJJ52509
UniProt:
A0AAX2I180
LinkDB
All DBs
Position
complement(3132721..3133416)
Genome browser
AA seq
231 aa
AA seq
DB search
MENREFEACLTLTAEEEGKYLNAYLPLVKRIVRQLSFQADSVIGKEDMQQIALMGLLEAL
RRYGHPDGQFAAYAVHRIRGSILDQLREHDWRPRRLRQKTHKTNEAIRQIAKRLGHEPNF
EEISAELNLTADEYQEYLLLENAGAMESLDEILALEAHNDILQSRDLEENIIIEDNLKQA
ISTLDEREQMILHLYYQQELSMKEIAQVLDLTEARICQLNKKLVQKIKSFF
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagagagtttgaagcgtgcttaacgctcaccgccgaagaggaaggaaaatat
ctgaatgcgtatttaccgctggtaaaacgtattgtcaggcagctctctttccaggcggat
agcgtcatcggcaaggaggatatgcagcaaattgcattgatggggttattagaggcactg
cgccgctatggtcaccctgacgggcaatttgccgcttatgccgttcatcggatccgaggt
tcaatattggatcaattgagggagcatgattggcgaccccgccggttgcggcagaaaacc
cataaaaccaatgaggctatccggcaaatcgcgaaacgtctgggccatgaacctaacttt
gaggagatcagcgctgaattaaacctgacggcagatgaatatcaggaatatcttttgttg
gagaatgcgggtgcgatggaaagcctggatgaaattctcgcattagaggctcacaatgat
attttgcaaagtcgggatctggaagagaatattattattgaagataatctcaaacaggcg
attagcacattagatgaacgtgaacagatgattttgcatctttattatcagcaagaactg
agtatgaaagagattgcacaagtactggatctcacggaggcacgcatctgccaacttaat
aagaaattagtacaaaaaattaaatcatttttttaa
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