Yersinia pestis Shasta: BZ15_424
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Entry
BZ15_424 CDS
T03718
Name
(GenBank) rmlD substrate binding domain protein
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
ypv
Yersinia pestis Shasta
Pathway
ypv00051
Fructose and mannose metabolism
ypv00541
Biosynthesis of various nucleotide sugars
ypv01100
Metabolic pathways
ypv01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ypv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
BZ15_424
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BZ15_424
Enzymes [BR:
ypv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
BZ15_424
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
adh_short
Glyco_trans_4_2
Mur_ligase
Glyco_transf_4
HNF-1_N
NmrA
Motif
Other DBs
NCBI-ProteinID:
AJJ52946
UniProt:
A0AAX2HY18
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All DBs
Position
468794..469312
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AA seq
172 aa
AA seq
DB search
MTKIALITGITGQDGSYLAEFLLEKGYEVHGIKRRASSFNTSRIDHIYQDRHETNPRFFL
HYGDLTDTSNLIRLVQEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRIN
GLEKKTRFYQASTSELYGLVQETPQRETTPFYPRSPLCCCQNVCLLDYSKLP
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgactaagattgcgctcattactggtattacaggacaagatggctcttatttggccgag
tttttattagaaaagggttatgaggttcatggtattaagcgccgagcttcatcttttaat
accagccgcattgatcatatttatcaagatcgccatgagacgaatccacgcttcttttta
cattatggtgacttgactgacacgtcgaatttaattcgtttggtccaggaaattcagcct
gatgagatttataatttgggtgcacaatctcatgtggctgtttcattcgaatcaccggaa
tatactgccgatgttgatgccatggggacactgcgcttgctagaggccattcgtatcaat
gggcttgaaaagaagactcgtttctatcaagcctcaacctcagagctttatggtttagtg
caggaaacgcctcagcgtgaaacaacgccattctatccgcgttctcctttatgctgttgc
caaaatgtatgcttactggattacagtaaattaccgtga
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