Yersinia pestis Shasta: BZ15_4261
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Entry
BZ15_4261 CDS
T03718
Symbol
dnaE
Name
(GenBank) DNA polymerase III
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ypv
Yersinia pestis Shasta
Pathway
ypv03030
DNA replication
ypv03430
Mismatch repair
ypv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BZ15_4261 (dnaE)
03430 Mismatch repair
BZ15_4261 (dnaE)
03440 Homologous recombination
BZ15_4261 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypv03032
]
BZ15_4261 (dnaE)
03400 DNA repair and recombination proteins [BR:
ypv03400
]
BZ15_4261 (dnaE)
Enzymes [BR:
ypv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BZ15_4261 (dnaE)
DNA replication proteins [BR:
ypv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BZ15_4261 (dnaE)
DNA repair and recombination proteins [BR:
ypv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BZ15_4261 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
AJJ48933
UniProt:
A0AAX2I7A7
LinkDB
All DBs
Position
pMT:complement(34263..37376)
Genome browser
AA seq
1037 aa
AA seq
DB search
MKALMVRTDFSLGESALKAENAVKIARDAGYTAVISADSMNIASVIPLQRAAGDDMAVIC
GVKLNVVDDPTYEHRARLAKESERCMESLVRDRSYCFTALIKNEQGYRDVCELMTLANKR
EQFYFVPRLALDQLAAAYAKGNIILLTSDIGSVFQRRDFAKIIGTLVTAGGRDNFYSVVY
PHPTPFYDQINVRAMKVASALKIEPVAFYPAYYEAVDDADIKDIAHMVTNNIKIDQPHRL
RIPHQRDNAVNGRRHLLEALKAFSVRMDVPVTAAMASTTQDTIIEACTWRWHELPPALPK
MADDEPATLMKLAVAGLRKRLTTKEFGYTPPASEHRVYVDRLKYEMDTLTRLGFCGYFLM
VRDLMNHSRETGIPVGPGRGSSAGSLVAWCIGITNVDPIRHGLLFERFINPERLDLPDAD
LDFSQARRHEVIEYLNERYGEDYVAGIPNFTYLGAASALRDTARIYGVDAADMAVSKEFK
NLEDDSLSLEELREQLASLDKYATKYPEAFKAACKLQSLMRGFGRHAAGMIVAGVPLVER
TPVELRGNARCIAFDKRYCEAMGLIKLDVLGLATLDLLDSAKRYIKESTGEDINLDAIPL
DDRKVLDGFAAGYTQGVFQLESGPMRKLLKDLGGGIEPMSFKTVVATTALFRPGPIQSGM
LDDYVSVAKGFMAPQSLHPVLDELTAETNGVILYQEQTMNATRLLAGFTMAEADGVRKAI
GKKDMEKMKSMGEKFVVQAQAGWIDVEMEDGTTQRIHRAEHFKCEDGALRTVEEALEAGV
KLPMAAVRVTGSQPGLSETKAKEIWDAFEKNGAYQFNKSHPVAYSLISYQSMWLKTHYPA
EFFAAALTILGEDKHQGLVKDALTYGIHVLPPDVNVSSNRIEIRTLEDGSQVLYAPFSAV
KGCSENGCQAIMRAREKVGGKFESLEQFEEAVEKRACACNSRVRESLQKVGAFASIEPGS
LPATDPERLRDQAELMGNLVIDAVKASRPFEMNPKRSAEVNVLMTRMAAEMGLGVTNGAI
VIHTQRLKSDPGGNLLS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctctgatggtcagaactgacttctccctgggagagtcagctctaaaagcagaa
aacgcggtgaaaatcgcgagagacgctggctacactgctgtcatttccgctgacagcatg
aacattgccagtgtgattcccctgcagcgtgccgctggcgacgatatggcggttatttgt
ggtgttaagctgaatgtggtcgacgatccgacatacgagcaccgcgcccgccttgcgaaa
gaatcagagagatgtatggaatcattggtgcgtgatcgcagctactgcttcacggcactg
ataaagaatgagcaaggttatcgcgacgtgtgcgaactgatgaccttagcgaacaagcgc
gagcaattctactttgtcccgcgtctggcgctcgaccaactggcggccgcgtatgccaaa
ggcaacatcatcctgctgacgtccgacattggcagtgtattccagcgccgggacttcgca
aagattatcgggacgctggtcacagctggaggacgcgataacttctacagcgtggtttat
ccgcaccctaccccattctacgaccagattaacgtccgggcgatgaaagtagcgagcgca
ctgaaaatagagccagtggcgttctatcccgcttattacgaagcggtcgacgacgctgac
attaaagacattgcgcacatggttacgaacaacatcaaaatcgaccagccgcatcgtctg
cgtattccccaccagcgagataacgccgttaatggtcgccgccatctccttgaagcgctg
aaagccttctccgttcgcatggatgtaccggtaacagctgcaatggcctcaacaacgcag
gacaccattatcgaagcctgcacatggcgctggcatgaattgccaccagcactgcccaag
atggcagacgacgagcctgcaacgctgatgaagctggctgtcgcggggctgcgcaagcgt
cttactaccaaagagtttggctacacaccaccggcttctgagcaccgcgtgtatgttgat
cgtctgaagtacgaaatggacacgctgacccgtctgggcttctgtggctacttcctgatg
gtgcgcgacctgatgaatcacagccgtgaaactggcattcctgtcgggccaggtcgtggt
tcctctgccggttctctggtggcgtggtgcatcggcataaccaacgtcgatcctatccgt
cacggtcttctgtttgagcgtttcatcaaccctgaacgtctcgacttaccggatgcggat
ctggacttcagccaggcacgtcgccatgaggtgatcgagtatctgaatgaacgctatggc
gaagattacgttgccggtattccgaacttcacctatctgggcgcggcttctgcgctgcgt
gacaccgcacgtatttacggtgtcgatgctgcggatatggcggtatccaaagagttcaag
aatctggaggacgatagcctgtcgctggaagagctgcgcgagcaactggccagcctggac
aaatacgccacgaaatacccggaagcgttcaaagcggcgtgtaagctgcaaagcctgatg
cgtggttttggtcgccacgctgcggggatgatcgtcgctggcgttccactggtagagcgc
acgcccgtcgagctgcgtggcaatgctcgctgtattgcattcgataaacgttactgcgag
gcgatggggctgattaagctggacgttctcggtctggcaacgctcgatctgttggatagc
gcgaaacgctacatcaaagagagtaccggggaagacatcaatctcgatgctatcccactg
gacgatcgtaaggttctggatgggttcgctgcagggtacacgcagggcgtattccagctg
gagtccggtcccatgcgcaagctgcttaaagatctgggcggtggcatcgagccaatgagc
ttcaaaaccgttgtcgccacgaccgcactcttccgacctggcccgattcaatccggcatg
ttggacgactatgtctccgtggccaaaggcttcatggctccacagtcgctgcacccggta
ctggacgagcttaccgcggaaaccaacggcgtgattctgtatcaggaacagacgatgaac
gcgacacgattgctggccggtttcacgatggccgaagcagatggtgtacgtaaagcgatc
ggtaaaaaggatatggaaaagatgaagagcatgggcgagaagttcgtcgttcaggctcaa
gctggttggatcgacgttgagatggaagacggcaccacgcagcgtattcaccgcgcggaa
cacttcaaatgtgaggacggcgcactgcggacggtcgaagaagcgctggaggcaggtgtg
aaattgccgatggctgctgtacgcgttacagggtcacaaccgggcttgtctgagacgaaa
gctaaggagatctgggatgccttcgagaagaacggtgcgtatcagttcaacaaatcacat
cccgttgcctactcgctgatcagctatcagtctatgtggttaaagacacattaccctgct
gagtttttcgctgctgcgctcaccattctgggcgaggataagcaccaggggctggttaag
gatgcgctgacctatggcattcacgtattgccaccagacgttaacgtgtcatctaaccga
attgagatccgcacgctggaagacggcagccaggttctgtatgcgccattctctgctgta
aaaggctgctctgagaatggttgccaggccatcatgagagcgcgtgagaaagttggcggc
aaattcgagtcacttgagcaatttgaggaagcggtcgagaagcgtgcgtgtgcgtgtaac
agccgggtacgcgagtcactgcaaaaagtaggtgcgttcgcatcgattgagcctggcagt
ctgccagcgacagatccggaacggctgcgcgaccaggctgaattgatgggcaatctggtg
atcgacgctgtaaaagcctctcgaccgttcgagatgaaccctaaacgctctgccgaagtg
aatgtactgatgacacgcatggcggctgaaatgggtctgggtgtaacgaacggtgcaata
gtgatccacacccaacgcctgaaatcagatccagggggtaatctgctctcctga
DBGET
integrated database retrieval system
