Yersinia pestis PBM19: CH59_1805
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Entry
CH59_1805 CDS
T03716
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ypw
Yersinia pestis PBM19
Pathway
ypw00521
Streptomycin biosynthesis
ypw00523
Polyketide sugar unit biosynthesis
ypw00525
Acarbose and validamycin biosynthesis
ypw00541
Biosynthesis of various nucleotide sugars
ypw01100
Metabolic pathways
ypw01110
Biosynthesis of secondary metabolites
ypw01250
Biosynthesis of nucleotide sugars
Module
ypw_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
ypw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CH59_1805 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CH59_1805 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CH59_1805 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CH59_1805 (rfbB)
00525 Acarbose and validamycin biosynthesis
CH59_1805 (rfbB)
Enzymes [BR:
ypw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CH59_1805 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AJI93560
UniProt:
A0AAX2HW22
A0A5P8YB68
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All DBs
Position
complement(2061234..2062301)
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AA seq
355 aa
AA seq
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MRRILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLSVVAGSERYAFEQVDI
CDSSELDRVFAQYQPNVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQLS
VEAKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL
PTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQVV
TEGVVGETYNIGGHNERKNIEVVETICALLDELVPAKPAGIAHYRDLITYVKDRPGHDMR
YAIDAGKIERELGWRPQETFESGIRKTVLWYLNNESWWRRVQDGSYAGERLGLSD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgaggcgaattctcgtcacaggcggggccggttttatcggctctgcggtggtcaggcat
attattgatggcacctcagatagcgtggtggtagtcgataaactcacctatgccggtaat
ctggagtcgctgtcagtggttgcgggcagtgagcgttatgctttcgaacaagtcgatatc
tgtgacagcagtgagttggatcgggttttcgcacagtatcagccgaatgtggtgatgcat
ttggctgccgagagccacgttgaccgctcaattgatggccccgccgcgtttatcgagacg
aacgtggttggcacttacaccctgttggaagctgcccgtcactattggcaacaactgagt
gttgaagccaagcaggcgttccgctttcaccatatctcaacggatgaggtgtatggcgat
ttacacggcactgacgatttgtttaccgaaaccacgccgtatgcgccaagcagcccatat
tcggcgtctaaagcgtccagtgaccatttagtccgggcttggttgcgtacttatggttta
ccgactttggtgactaattgttcaaataattacggcccgtatcacttcccagaaaagctg
atcccgctggttattttaaatgcgttggcgggtaagccgctgcctgtttatggcaatggt
gctcaggtccgcgactggttgtatgtagaagaccacgccagagcgttgtatcaggtggtt
actgagggtgtggtgggtgaaacctacaatatcggcggccataatgagcgcaagaatatt
gaagtagttgaaaccatttgcgcgctattggatgagttggtgccagcaaaaccggcgggt
atcgcacactaccgtgatttgattacctacgtaaaagaccggccgggtcatgatatgcgc
tatgccattgatgctggcaagattgagcgggaactgggttggcgtccacaagaaaccttc
gaaagcggtatccgtaaaacggtcttgtggtatttgaataatgaatcttggtggcgtcgt
gttcaggatggctcttacgccggagagcgtttgggcttgagtgactaa
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