Yersinia pestis PBM19: CH59_230
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Entry
CH59_230 CDS
T03716
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ypw
Yersinia pestis PBM19
Pathway
ypw03030
DNA replication
ypw03430
Mismatch repair
ypw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH59_230 (holB)
03430 Mismatch repair
CH59_230 (holB)
03440 Homologous recombination
CH59_230 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypw03032
]
CH59_230 (holB)
03400 DNA repair and recombination proteins [BR:
ypw03400
]
CH59_230 (holB)
Enzymes [BR:
ypw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH59_230 (holB)
DNA replication proteins [BR:
ypw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CH59_230 (holB)
DNA repair and recombination proteins [BR:
ypw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CH59_230 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
DUF6587
Motif
Other DBs
NCBI-ProteinID:
AJI92070
UniProt:
A0AAX2HZ26
LinkDB
All DBs
Position
complement(273717..274739)
Genome browser
AA seq
340 aa
AA seq
DB search
MNWYPWLNAPYRQLVGQHSTGRGHHALLLHSLPGNGEDALIYALSRWLMCQQRQGEKSCG
ECHSCRLMLAGNHPDWYVLTPEKGKSSIGVELVRQLIDKLYSHAQQGGAKVVWLPHAEVL
TDAAANALLKTLEEPPEKTYFLLDCHQPASLLATLRSRCFYWYLACPDTAICLQWLNLQW
RKRQIPVEPVAMLAALKLSEGAPLAAERLLQPERWSIRSALCSGLREALNRSDLLSLLPQ
LNHDDAAERLQWLSSLLLDALKWQQGAGEFAVNQDQLPLVQQLAHIAATPVLLQLAKQLA
HCRHQLLSVVGVNRELLLTEQLLSWETALSTGTYSTLPSL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaattggtatccgtggcttaacgccccttaccgccaactggttgggcagcacagtacc
gggcgcgggcaccatgcattactgctgcattcattacccggtaatggcgaagacgcattg
atttatgcgctgagtcgttggctaatgtgtcagcagcggcaaggtgagaagagttgtggt
gaatgccatagctgccgcttgatgttggcaggcaaccaccccgattggtatgtactgaca
ccggaaaaaggcaaaagcagtatcggggttgagttggttcgtcaattgattgataaactg
tattcccatgctcaacaaggcggtgcaaaggtggtgtggttgccacatgccgaagtgttg
accgatgccgctgctaatgccctgctaaaaacgctggaagagcctccagagaagacctat
tttctgttggattgccaccaacccgccagcttgctggctacactgcgtagccgctgtttt
tattggtatctggcttgcccggatacggctatttgtctgcaatggctcaatctgcaatgg
cgtaagcggcagatccctgtggagcccgttgcgatgttggcggccctgaaattgagtgaa
ggcgcaccgctggcggctgagcggttgctccaaccagagcgttggagtatccgcagcgct
ttgtgtagcgggctacgcgaggcactgaaccgctcagacttgctgtcgttgttaccacaa
cttaaccatgatgatgctgctgaacgtctgcaatggctctcttcactgctcttggatgcg
ttgaagtggcagcaaggggcaggggagtttgcggttaatcaggatcaattacccttagtg
caacagttggcacacatcgcggcgacgccagtattacttcagttggctaagcaactggct
cattgccgccatcaattattatctgtggtaggtgttaatcgtgaattgttactcactgag
caactgcttagctgggaaacagcactgtccacgggtacttattccaccttaccttcgttg
taa
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