Yersinia pestis PBM19: CH59_2593
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Entry
CH59_2593 CDS
T03716
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
ypw
Yersinia pestis PBM19
Pathway
ypw00230
Purine metabolism
ypw00240
Pyrimidine metabolism
ypw01100
Metabolic pathways
ypw01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ypw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
CH59_2593 (nrdD)
00240 Pyrimidine metabolism
CH59_2593 (nrdD)
Enzymes [BR:
ypw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
CH59_2593 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AJI92096
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Position
complement(2905819..2907945)
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AA seq
708 aa
AA seq
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MIKRDGCQVPFDEVRIKEAVERAALAVGVVDADYCATVARVVAQTMENQPKVDIREIQNA
VENQLMAGQYKQLARAYIEYRHDRDISRELRGRLNQEIQGLVEQSNKALLNENANKDSKV
IPTQRDLLAGIVAKHYAKQHLLPRDVVLAHERGEIHYHDLDYAPFFPMFNCMLIDLEGML
TQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTESFNKHK
AVAEEWQIPDVAGYAMSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWQSR
MIQQAILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKFGDANYDIKQLALECATKRMYPD
ILNYDQVVKVTGSFKTPMGCRSFLGVYEEEGQQIHDGRNNLGVISLNLPRIALEAKGDEN
QFWQLLDERLLIAKKALMTRIARLEGIKARVAPILYMEGACGVRLQADDNIAEIFKNGRA
SISLGYIGIHETINALFGHQTHLFDDQKLREKAIAIVAHLKQATDDWKDETGYAFSLYST
PSENLCDRFCRLDTAEFGVVEGVTDKGYYTNSFHLDVEKKVNPYDKLDFEAPYPPLANGG
FICYGEYPNLQHNIRALEDVWDYSYSRVPYYGTNTPIDECYECGFTGEFSCTSKGFTCPK
CGNHEPSKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLANGQLG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaacgggacggctgccaggtaccttttgatgaagttcgtatcaaagaggctgtt
gagcgcgcagcattagctgttggcgtggtcgatgccgattattgtgcaaccgttgcccga
gtggtcgctcaaacgatggaaaaccagccgaaggttgatatccgtgaaattcaaaacgcg
gtagaaaaccaactgatggcgggtcaatacaaacagttagcccgggcttacatcgaatat
cgtcatgatcgtgatatctcacgggaactgcgtggccgcttgaatcaggaaattcaaggg
ttagtggagcaaagcaacaaagcactgctgaacgaaaatgccaacaaagacagcaaagtg
atccctacccagcgcgatctgttggccggtattgttgccaagcactacgctaaacagcat
cttttgccccgcgatgtggtgctggcccatgagcgcggcgaaattcactatcatgatctg
gattacgcgccgttcttcccgatgttcaactgtatgttgattgatttggaaggcatgtta
acccaaggttttaaaatgggtaatgcggaaatagagccgccaaaatccatttctaccgca
accgctgtaaccgcacaaattatcgcgcaggttgccagccatatctatggtggcaccacc
attaaccgtattgatgaagttttggccccttttgtcacggaaagctttaataaacataag
gctgtcgccgaagagtggcagatccctgatgttgcaggttatgccatgtcgcgtaccgaa
aaagagtgttacgacgccttccagtcactggagtatgaggtcaatacactgcataccgcg
aatggccaaacgcccttcgtcaccttcggttttggcttgggcaccagttggcaatcacgc
atgatccagcaggctattttgcgtaatcgtattgcgggcttgggtaaaaaccgtaaaacg
gcggtattcccaaaactggtatttgctatccgcgatggcctgaaccacaaatttggcgat
gctaactacgatatcaaacagttggcgctggagtgcgcaaccaagcgcatgtatccagat
attcttaattatgatcaagtggttaaggtcactggctcctttaaaacgccaatgggctgc
cgtagcttcctcggcgtgtatgaggaggagggtcaacaaatccacgatggccggaataat
ttgggagtgatcagccttaatctgccacgtatcgcgttggaagcaaaaggggatgaaaac
caattttggcagttgctggatgagcgcctgcttatcgcgaaaaaagcgctaatgacccga
attgcccgtttagaagggatcaaagcacgagtcgcccccattctgtatatggaaggtgct
tgcggtgtacgcttacaagcggatgataatattgccgaaatctttaaaaatggccgtgcg
tcgatctcgctgggctatatcgggatacatgaaaccattaatgccttattcggccatcag
acccatctctttgatgaccagaagctgcgcgaaaaagccatcgccattgtggctcatttg
aaacaggctaccgatgattggaaagatgaaaccggttatgcctttagcctatacagcacc
ccaagtgaaaacttgtgtgaccgcttctgccgccttgataccgctgaatttggtgtggtt
gaaggggtgacggacaaaggctattacaccaacagcttccatctggatgttgagaaaaaa
gtgaatccctacgacaaactggatttcgaagccccttatccgccgctggctaacggtggt
ttcatctgttacggcgaataccctaatttgcagcacaacatccgggcgctggaagacgtc
tgggattacagctacagccgggttccttattacggcaccaacacgccaattgatgagtgc
tatgaatgcggcttcaccggtgaattctcttgtaccagcaaaggctttacctgcccgaaa
tgcggcaaccatgagccatcgaaagtgtcggtcacccgccgggtatgtggttatttgggt
agcccagatgcacggccatttaatgcgggtaaacaagaagaagtgaaacgccgggtgaaa
catctggctaacgggcagttgggctga
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