Yersinia pestis PBM19: CH59_4378
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Entry
CH59_4378 CDS
T03716
Symbol
caf1A
Name
(GenBank) F1 capsule-anchoring protein
KO
K07347
outer membrane usher protein
Organism
ypw
Yersinia pestis PBM19
Pathway
ypw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ypw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CH59_4378 (caf1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypw02000
]
CH59_4378 (caf1A)
02044 Secretion system [BR:
ypw02044
]
CH59_4378 (caf1A)
02035 Bacterial motility proteins [BR:
ypw02035
]
CH59_4378 (caf1A)
Transporters [BR:
ypw02000
]
Other transporters
Pores ion channels [TC:
1
]
CH59_4378 (caf1A)
Secretion system [BR:
ypw02044
]
Chaperone-usher system
Type 1 pilus assembly protein
CH59_4378 (caf1A)
Bacterial motility proteins [BR:
ypw02035
]
Pilus system
Fimbrial proteins
CH59_4378 (caf1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_C
DUF6175
Motif
Other DBs
NCBI-ProteinID:
AJI89317
LinkDB
All DBs
Position
pMT1:72784..74592
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AA seq
602 aa
AA seq
DB search
MGETYSDSSIFDSIPIKGIKIASDESMVPYYQWNFAPVVRGIARTQARVEVLRDGYTVSN
ELVPSGPFELANLPLGGGSGELKVIIHESDGTKQVFTVPYDTPAVALRKGYFEYSMMGGE
YRPANDLTQTSYVGALGMKYGLPRNLTLYGGLQGSQNYHAAALGIGAMLGDFGAISTDVT
QADSQKNKQKKESGQRWRVRYNKYLQSGTSLNIASEEYATEGFNKLADTLNTYCKPNTRN
DCRFDYAKPKNKVQFNLSQSIPGSGTLNFSGYRKNYWRDSRSTTSFSVGYNHFFRNGMSL
TLNLSKTQNINKYGEKTSELLSNIWLSFPLSRWLGNNSINSNYQMTSDSHGNTTHEVGVY
GEAFDRQLYWDVRERFNEKGRKYTSNALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNM
VITQYGITAGQKTGDTIALVQAPDISGASVGYWPGMKTDFRGYTNYGYLTPYRENKVEIN
PVTLPNDAEITNNIVSVIPTKGAVVLAKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQ
SSSSGIVGDNSGVYLTGLPKKSKILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCIL
NN
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
ttgggggaaacctattctgatagcagtatctttgacagtatcccgattaaggggataaaa
attgcttcagatgaatcgatggttccttattaccaatggaattttgctccagttgttcgc
ggtatcgcacgtacacaagccagggtagaggttttaagagatggctacactgtaagtaat
gagttggtgccctcgggaccatttgagttagcaaatcttcctctgggtggggggagtggt
gagctgaaagtcatcattcatgaaagtgatggaacaaagcaagtttttacagttccatat
gacacaccagcagtggcattacggaagggctatttcgaatattcaatgatggggggagaa
tatcgtccagctaatgatcttacacaaacatcgtatgttggcgctcttgggatgaaatat
ggtttgccaaggaatcttacgttatatggtggactacaagggtcccaaaattatcatgcc
gcagctctgggtatcggtgctatgttgggtgattttggtgccatatctacagatgttact
caagcagacagccagaaaaataaacaaaaaaaagaaagcggccaacgttggcgcgttcga
tataataagtacttgcagagtggaacatcgttaaacattgctagcgaggaatacgccaca
gaaggatttaacaaactcgctgacacgttaaatacttattgtaaacctaatactagaaac
gattgccgttttgattatgctaaacccaaaaacaaagtgcaattcaatttaagtcaaagc
atacctggttcggggacgcttaatttcagtggctacagaaaaaactattggcgtgacagt
aggagcacaacttctttttctgtaggctataaccatttttttaggaatggtatgtcattg
actttaaatttatcgaagacacagaatatcaataagtatggagaaaaaactagtgagcta
ttatctaatatctggttgagttttcctctcagtcgctggctaggtaataactcaataaat
tcaaattaccaaatgacatcagattctcatggtaacactacccatgaggtaggtgtgtac
ggtgaagcctttgatcgccaattatactgggacgttcgcgaacgttttaatgaaaagggc
agaaaatatacctccaatgcactgaatttgaattatcgaggaacttatggggagatcagt
ggtaactacagctacgatcaaacccaaagccaacttggtataggtgtaaatggcaatatg
gtaataactcagtacggtataacggctggccaaaaaactggagatactattgcattagta
caagcccctgatataagcggtgcttcagtgggatactggccaggcatgaaaacagacttt
agggggtacaccaattatggttacttaaccccttacagagagaataaggtagaaattaac
ccagttactttacccaatgatgcagagataacaaataatattgttagcgtgatcccgaca
aagggagctgtagtattagcaaaatttaacgcaaggattggtggacgattgtttttacat
ttaaaacgctctgacaataaacctgttccatttggttctatagttaccattgaagggcaa
tcatccagctctggcattgtcggagataatagcggtgtctatttgactggactacctaaa
aaatcaaaaatacttgttaagtgggggagagataaaaatcaatcatgttcatctaatgta
gttctaccagaaaaaacggatatttctggtgcttataggttatccacaacctgcatctta
aataactga
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