Yersinia pestis D182038: YPD8_0898
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Entry
YPD8_0898 CDS
T01833
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ypx
Yersinia pestis D182038
Brite
KEGG Orthology (KO) [BR:
ypx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ypx01002
]
YPD8_0898
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypx01011
]
YPD8_0898
Peptidases and inhibitors [BR:
ypx01002
]
Cysteine peptidases
Family C82
YPD8_0898
Peptidoglycan biosynthesis and degradation proteins [BR:
ypx01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
YPD8_0898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
ACY61586
LinkDB
All DBs
Position
complement(1166514..1168223)
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AA seq
569 aa
AA seq
DB search
MSVAQSRSQLLAALPKDVVPLYAAELASLYAANQMQPMWQDRVAVQRFQQQLAEVGLSGI
QPQFMQWVKWLSEPEITGMARDIILSDAMLGYLHFISGVGANGSVWLYSNVPYKMAMPPA
AVLNAWQKAVNEGSTASYLASLAPQHPQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQL
SDDIPALREILDRTGMLHPTTPVKAPEVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVS
PSAVSVPESDDAAPAPMPPVSVVTLTDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREW
LNVSPQTRATLLALNIQRLRILPGHVDNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSR
KTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINP
SMIDWSIISPNNFPYRLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSS
GCVRVNKASDLANMLLQDAGWNDARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGK
PQFRTDIYNYDKMVRSGAQISQQAEFLLQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggctcaaagtcgttcgcaattattggccgcgcttccaaaagatgtcgtgcca
ctctatgccgcggaattagcgtcattatatgcggcgaaccaaatgcagcctatgtggcaa
gaccgggttgctgttcaacgttttcagcaacagttagcggaggttgggctttcaggcatt
caaccgcagtttatgcaatgggttaaatggttgagcgagccagaaatcaccggtatggcg
cgtgatattattctatcggatgcgatgctgggttatttacactttatttccggtgtcggt
gctaatggcagtgtttggttatacagtaatgtgccttacaaaatggccatgccgcctgca
gcagttttaaacgcctggcagaaagcggtcaatgaaggctcgacagcctcttatctggcg
tcgttggctccgcagcatccgcaatacgataaaatgcaacaggcgttgaagttgatgcta
gcagaccgacgcccgtggccacagatgcctactgggccaagtttacggccggggcaactt
agcgacgatatccctgcattgcgggaaatccttgaccgaacgggtatgttgcacccaaca
acccccgtgaaagcgccagaggtgatccctgtggagaaccctacggtggccgtcgttaat
gacgatctctctgttgatgaagaaaaaaatcggactcagaccaacagcttggtggtcagc
ccatcagccgtctctgtccctgagagcgatgatgcggcacccgcaccgatgcctcccgtg
agcgtggtcacgttaactgacaatatctatactcctgagttggtagaagccgttaaacgc
ttccagcaatggcaggggctcactgatgacggtgttatcggcccccgtacccgcgaatgg
ttgaatgtctcgccacaaacgcgggccacgttattggcattgaatatccagcgattacgt
attttgccggggcatgttgataacgggattatggttaatatcccaaattattctctgaat
tattataaagatggggccgaagtgctttcatctcgggtgattgttggccgtccaagtcgt
aaaacgcccctgatgagtagtgcgttgaataatgtggtggtgaacccgccgtggaacgtg
ccgacctcattggtacggcaggatatcgtgcccaaagcacgtaacgatgccgggtatttt
cagcgtaatggctataccgtgttgtccggatggagtaatgatgctgaagtgatcaatcct
tcaatgattgactggagtattatctcgccgaataacttcccttaccgtttgcgtcaggca
ccaggtgctaataactcgttagggcggttcaaatttaacatgccaagttctgatgctatc
tatttacatgacacgccgaatcatggcctgttccaaaaggacattcgcgccctgagttca
ggttgtgtccgtgtcaataaagcgtctgatttagcgaacatgctgctgcaagatgctggc
tggaatgatgcacgggtctcttccaaggtaaaacaaggtgataccacctacgtcaatatc
cgccagcgcgttccggtgcaattgtattatctgacagcatgggttgcggaagacggtaaa
ccgcagtttagaacagatatttacaattatgataaaatggtgcgatctggtgcacaaatc
tcacagcaggctgagtttttattgcaataa
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