Yersinia pestis D182038: YPD8_1060
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Entry
YPD8_1060 CDS
T01833
Symbol
ompC
Name
(GenBank) outer membrane protein C, porin
KO
K09475
outer membrane pore protein C
Organism
ypx
Yersinia pestis D182038
Pathway
ypx01501
beta-Lactam resistance
ypx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ypx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YPD8_1060 (ompC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YPD8_1060 (ompC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypx02000
]
YPD8_1060 (ompC)
Transporters [BR:
ypx02000
]
Other transporters
Pores ion channels [TC:
1
]
YPD8_1060 (ompC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Porin_4
Motif
Other DBs
NCBI-ProteinID:
ACY61745
LinkDB
All DBs
Position
complement(1377075..1378190)
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AA seq
371 aa
AA seq
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MKLRVLSFIIPALLVAGSASAAEIYNKDGNKLDLYGKIDGLHYFSDNKNLDGDQSYMRFG
LKGETQITDQLTGYGQWEYQVNLNKAENEDGNHDSFTRVGFAGLKFADYGSLDYGRNYGV
LYDVTSWTDVLPEFGGDTYGADNFLSQRGNGMLTYRNTNFFGLVDGLNFALQYQGKNGSS
SETNNGRGVADQNGDGYGMSLSYDLGWGVSASAAMASSLRTTAQNDLQYGQGKRANAYTG
GLKYDANNVYLAANYTQTYNLTRFGDFSNRSSDAAFGFADKAHNIEVVAQYQFDFGLRPS
VAYLQSKGKDIGIYGDQDLLKYVDIGATYFFNKNMSTYVDYKINLLDKNDFTKNARINTD
DIVAVGMVYQF
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcgagttctttcattcattattccggccttattggttgcaggcagtgcaagt
gctgcggaaatatacaataaagacggtaataaactggatttatacggtaaaattgacggg
ttacattatttttccgataacaagaaccttgatggtgaccaatcttacatgcgttttggc
ctgaaaggcgaaacacaaatcactgaccaactgactggttatggtcagtgggaatatcag
gtcaatctgaataaagcagagaatgaggacgggaaccacgacagtttcacccgtgtaggt
tttgcgggtctgaaatttgctgactacggttcattagattatggccgtaactacggtgtc
ctgtacgatgtcacttcatggactgacgttctgccagaatttggtggtgatacttacggt
gctgataacttcctgtcacaacgcggtaacgggatgctgacttaccgtaacaccaatttc
ttcggcttggttgatggcctgaactttgctctgcaatatcagggtaaaaatggcagcagt
agtgaaaccaacaatggtcgcggtgtagcagatcaaaacggtgatggctacgggatgtcc
ttgtcttatgacctgggttggggggtgagtgcatcagcagcgatggcgagttctctgcgt
accactgcgcaaaatgacctgcagtatggccagggtaagcgtgccaatgcctacaccggt
ggtctgaaatatgatgcgaacaacgtttatctggccgctaactatactcagacttacaac
ctgactcgtttcggtgatttcagcaatagatcaagtgatgccgctttcggttttgcagat
aaagcacacaacattgaagtcgttgctcaataccagttcgattttggtctacgtccatca
gtggcttacctgcaatccaaaggtaaagacattgggatctatggcgatcaagatctgctg
aaatatgttgatattggtgcgacttacttcttcaacaaaaacatgtccacctatgtggat
tacaaaatcaacttgttggataaaaacgatttcaccaaaaatgcccgcataaatactgat
gatattgtcgcagtaggtatggtctatcagttctaa
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