Yersinia pestis D182038: YPD8_2368
Help
Entry
YPD8_2368 CDS
T01833
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ypx
Yersinia pestis D182038
Brite
KEGG Orthology (KO) [BR:
ypx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ypx03009
]
YPD8_2368 (srmB)
Enzymes [BR:
ypx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YPD8_2368 (srmB)
Ribosome biogenesis [BR:
ypx03009
]
Prokaryotic type
rRNA helicases
YPD8_2368 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ACY63043
LinkDB
All DBs
Position
complement(3015144..3016469)
Genome browser
AA seq
441 aa
AA seq
DB search
MTVTNFSELDLDERLIDALRDKGYERPTAIQASAIPPAMDGRDVLGSAPTGTGKTAAFLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKYTQLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RKQTLLFSATLEGEAIREFAERILNEPVELEADPSRRERKKIQQWYYRADDIKHKTALLC
HLLKQPDVSKSIIFVRTRERVHELVSWLREAGINAWFLEGEMVQAKRTEAVIRLGDGRVN
VLVATDIASRGLDIDDISHVFNFDMPRTADVYLHRIGRTGRAGRKGVAISLVEAHDHILL
GKIGRYLNEPLKPRVIDELRPTSKAPSEKATGKPSKKVLAKRKEQKESSKEKVKVKVRHR
DAKNVGKRRTPKAKPDTKSAG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccaatttttccgaactcgatctcgatgaacgtctgattgacgcactgcgc
gacaaaggctatgagcgtcctacggctatccaggcttcggcgatcccgccggctatggat
gggcgtgacgtattaggttcggctccaacaggtaccggcaaaactgccgcctttttgctg
ccagccttgcagcatttgctggatttcccccgcaaaaaatccgggccaccgcggatcctg
atcctgacgccaacccgtgagttagccatgcaagtggcagaccaagcccgtgaactggca
aagtatactcagttggatatcgccacaataaccggcggcgtggcatatatgaaccatgcc
gaagtcttcagtgagaatcaggatgttgtcgttgccacgacaggccgcctgctgcaatac
atcaaagaagaaaactttgattgtcgtgcggtagagaccctgatcctggatgaagctgac
cgtatgctggacatgggttttgcccaagatattgaaaccatctcagccgaaacccgctgg
cgtaagcaaacactgctgttctctgccactcttgaaggtgaagccatccgcgaatttgcg
gagcgcattctcaatgagccagtagaacttgaggccgatccatcgcgccgcgaacgcaaa
aaaattcagcaatggtactaccgggctgacgacatcaagcataagacagcgttactttgt
catctgctgaaacagcccgatgtctcgaagtccatcatttttgttcgtacccgcgagcgt
gtccatgagttagtcagttggctacgtgaggcgggcattaatgcctggttccttgaaggc
gaaatggtacaagctaaacgtaccgaagcggtcattcgcttgggtgatggccgggtaaat
gtgctggttgccaccgatattgcctcacgcgggttggatattgatgatatcagccatgta
ttcaactttgatatgccacgcaccgccgatgtttatttacatcgtattggccgtactggc
cgtgctggccgcaaaggcgtcgccatttccttggttgaagctcatgatcatatcttgtta
ggcaaaattggccgttatcttaacgaaccactgaaaccacgcgttattgatgagttgcgc
ccaacgagcaaggcaccaagtgaaaaagcgacgggtaaaccctctaaaaaggttttagcg
aagcgtaaagaacaaaaagaatccagcaaagagaaagtaaaggttaaggttcgtcatcgt
gatgccaaaaacgttggtaagcggcgtacaccaaaagcaaaacctgataccaagagtgct
ggttag
DBGET
integrated database retrieval system
