Yersinia pestis D182038: YPD8_2974
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Entry
YPD8_2974 CDS
T01833
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1b
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ypx
Yersinia pestis D182038
Pathway
ypx00550
Peptidoglycan biosynthesis
ypx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ypx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YPD8_2974 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ypx01003
]
YPD8_2974 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypx01011
]
YPD8_2974 (mrcB)
Enzymes [BR:
ypx01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
YPD8_2974 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
YPD8_2974 (mrcB)
Glycosyltransferases [BR:
ypx01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
YPD8_2974 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ypx01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
YPD8_2974 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Motif
Other DBs
NCBI-ProteinID:
ACY63646
LinkDB
All DBs
Position
complement(3765241..3767244)
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AA seq
667 aa
AA seq
DB search
MRRPFDFPDGKEGQIRARLLFKNDRLAQIQNLDNQRDFGLFRLDPKLITMLQSPNGEQRL
FVPRAGFPDLLVDTLLATEDRHFYEHDGVSPYSIARAVVANLTAGKAVQGGSTLTQQLVK
NLFLTNERSLVRKLNEAYMALLMDYRYSKDRILELYLNEVYLGQSGGDQIRGFPLGSLYY
FGRPVDELSLDQQAMLVGMVKGASLYNPWRNPKLALERRNLVLRLLQNQGIIDAELYTML
SARPLGVQPKGGVITPQPAFMQMVRQELQQKLGNKVNDLSGVKIFTTLDPVSQDAAEKAI
EDGVPALRAARNMNDLEAAMVVVDRFSGEVRAMVGGSQPQFAGFNRAMQARRLVGSLAKP
PTYLAALSEPDKYRLNTWLSDQPLSLKLSNGSLWQPKNYDRQFRGQVMLMDALVNSLNIP
TVNLGMSVGLDQISATLQRLGIPKSVINPVPAMLLGAIDLTPVEVAQEYQTIASGGNRAP
LSAVRSVIAEDGTVLYQSFPQAERMVPAQASYLTLYAMQQGVVRGTSRSLSAKFGKYNLA
AKTGTTNDLRDSWFAGIDGKEVTIAWIGRDNNGPTKLTGASGALTLYRRYLENQTPLPLI
LQPPEGISQMNIDSAGNFVCGEGSGMRVIPVWTENPQALCQGSTPTQDPTKPNDDGVADW
IKEMFGQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
ttgcgccggccgttcgatttccctgatggtaaagaaggccaaattcgcgcccgtttactg
ttcaaaaatgatcgtctggcccagattcaaaacctggataatcagcgtgatttcgggcta
ttccgcctcgatcccaagttgattaccatgctgcaatcacctaacggtgaacagcgtctg
tttgttccgcgcgccgggttccctgatttgctggtggacaccttgctggcgactgaagac
cgccatttctatgagcatgatggcgtcagcccgtattccattgctcgagccgtggtcgct
aacctgacagccggtaaagcggtgcaggggggcagtacgctgacgcaacagttagtgaaa
aacctgttcctgaccaatgaacgttcgctggtacgtaaacttaacgaggcctatatggcc
ctgttgatggattatcgctacagcaaagatcggatcttggaactctatctgaacgaagtc
tatcttggtcagagtggtggtgaccaaatccgtggcttcccgctgggtagcttgtattac
tttggccgcccggttgatgaattgagtctcgatcagcaagccatgttggttggcatggtg
aaaggggcctcactgtataacccgtggcgtaatcctaagctggcacttgagcggcgtaat
ttggtcctgcgcttgttgcagaatcaagggattatcgatgctgagctttacaccatgctc
agtgcccgtccgctgggggtgcagccgaaaggcggagtcatcacacctcaacctgctttt
atgcagatggtgcgccaggagctgcaacagaagttgggtaacaaggtcaatgatctgtct
ggcgtgaagatcttcaccaccttggatccggtttcacaagatgccgcagaaaaagccatc
gaagacggtgttccggcgctgagagccgcccgtaatatgaatgacctggaagcggcgatg
gtggtggttgaccgtttcagtggcgaagtgcgtgccatggtgggcggttcacagccacaa
tttgccggttttaaccgtgcgatgcaggcccgccgtttggtggggtcacttgccaaacca
ccaacctatctggccgcgttgagtgagccggataagtaccgcctcaatacctggctttcg
gaccaaccgctgtcgcttaaattgtcgaacggttcattgtggcagccgaaaaactatgat
cgccagttccgtggtcaggtcatgttgatggatgcgttggtgaactcactgaacatccca
acagtcaatttggggatgtcagtgggcttagatcagatcagcgccacactgcaacgcctt
gggatcccgaaatcagtcattaatccggtcccagccatgttattgggggcgattgacctg
actccggttgaagttgcgcaggagtatcagacaatcgccagtggtggcaaccgtgcaccg
ttgtcggctgtgcgttcggttattgctgaggatgggaccgtgctgtatcagagcttccca
caggcagaacgtatggtgcctgcacaagcttcttacctgacgctgtatgcgatgcagcaa
ggggttgtccgtggtacatcacgctctctctcggcgaagttcggcaaatataatctggcg
gccaaaaccgggacaaccaacgatctgcgtgacagttggtttgccggtattgatggcaaa
gaagtgaccattgcctggattgggcgcgacaataacggcccgactaagctgaccggggcc
agcggcgcgctaaccttgtatcgccgctatctggaaaaccaaacgccgttgccgctgatt
ctgcaaccgccagaaggcattagccaaatgaacattgattcggcggggaacttcgtctgt
ggtgaagggagcgggatgcgcgtcattcctgtttggaccgaaaatccgcaagctttgtgt
cagggatcaacacccactcaagaccccacaaaacctaacgatgatggtgttgccgattgg
atcaaagagatgtttggccaataa
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