Yersinia pestis D182038: YPD8_3321
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Entry
YPD8_3321 CDS
T01833
Symbol
hemB
Name
(GenBank) delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
ypx
Yersinia pestis D182038
Pathway
ypx00860
Porphyrin metabolism
ypx01100
Metabolic pathways
ypx01110
Biosynthesis of secondary metabolites
ypx01120
Microbial metabolism in diverse environments
ypx01240
Biosynthesis of cofactors
Module
ypx_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
ypx00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
YPD8_3321 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ypx04147
]
YPD8_3321 (hemB)
Enzymes [BR:
ypx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
YPD8_3321 (hemB)
Exosome [BR:
ypx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
YPD8_3321 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
ACY63989
LinkDB
All DBs
Position
complement(4208326..4209348)
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AA seq
340 aa
AA seq
DB search
MSYAFPGTFPGRRMRRVRCHDFSRRLVAENHLTVNDLIYPVFVMEGTHQQQAVSSMPGVS
RMTIDLLLKEAEAIAKLGVPVISLFPVIEAGKKSLYAEEAYNPDGLVQRTVRALKDAVPE
LGILTDVALDPYTTHGQDGVIDSDGYVINDVTKEILVRQALSHAEAGAEIIAPSDMMDGR
IGAIRDQLERQGLVNTQIMAYSAKYASCYYGPFRDAIGSSSNLKGGDKKTYQMDPANSDE
ALQEIAQDLQEGADMVMVKPGMPYLDVVRRVKDTFGVPTFAYQVSGEYAMHMAAIQNGWL
QEKPTVMESLLCFKRAGADGVLTYFAKQVAQWLHDDQMQR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgcatttccgggcacctttcctggtcgccgtatgcgccgtgtacgctgtcat
gatttcagccgccgtttggttgccgagaatcacttgacggtcaatgacttgatttacccg
gtgtttgtcatggaagggactcaccagcaacaagccgtttcttcaatgccgggggtctct
cgtatgacaattgatctgctgctgaaagaagcagaagcaattgctaagctcggtgtgccg
gttatatcgctattcccggtcattgaagcagggaaaaaatcattatatgcagaagaggca
tataacccggatggtttagttcagcgtactgtgcgtgcgttgaaagatgcagttcctgag
ctaggtattctgactgacgtggcactcgatccctatacgacccatggtcaagatggtgtg
attgattctgatggttacgtgatcaatgatgtcaccaaagagattctagtgcgtcaggca
ctatcgcatgctgaagctggcgctgagattattgcaccaagcgatatgatggatggccgt
ataggtgcaattcgtgatcaattagagcgccaagggttagtgaacacccagataatggct
tattcggctaagtatgcgtcttgctactatggcccattccgcgatgcaattggctcgagc
agtaatctaaaagggggggataaaaaaacttatcagatggatcccgccaacagtgatgaa
gcactgcaagaaatagctcaagatttacaagaaggcgctgatatggtgatggtaaaacca
ggaatgccatatctggatgttgtacgcagggtgaaagatacttttggtgttccaaccttt
gcctatcaggtgtctggtgaatatgccatgcatatggcagcgattcagaatggctggctc
caagagaaaccgacggtgatggagtcgttgttatgctttaagcgtgcaggtgcggatggc
gtattaacttatttcgcaaagcaagttgcgcaatggctacatgatgaccagatgcagcgc
taa
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