Yersinia pestis D182038: YPD8_pMT0054
Help
Entry
YPD8_pMT0054 CDS
T01833
Name
(GenBank) DNA polymerase III
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ypx
Yersinia pestis D182038
Pathway
ypx03030
DNA replication
ypx03430
Mismatch repair
ypx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YPD8_pMT0054
03430 Mismatch repair
YPD8_pMT0054
03440 Homologous recombination
YPD8_pMT0054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypx03032
]
YPD8_pMT0054
03400 DNA repair and recombination proteins [BR:
ypx03400
]
YPD8_pMT0054
Enzymes [BR:
ypx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YPD8_pMT0054
DNA replication proteins [BR:
ypx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YPD8_pMT0054
DNA repair and recombination proteins [BR:
ypx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YPD8_pMT0054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
UDG
Motif
Other DBs
NCBI-ProteinID:
ACY64432
LinkDB
All DBs
Position
pMT1:complement(58573..62097)
Genome browser
AA seq
1174 aa
AA seq
DB search
MKALMVRTDFSLGESALKAENAVKIARDAGYTAVISADSMNIASVIPLQRAAGDDMAVIC
GVKLNVVDDPTYEHRARLAKESERCMESLVRDRSYCFTALIKNEQGYRDVCELMTLANKR
EQFYFVPRLALDQLAAAYAKGNIILLTSDIGSVFQRRDFAKIIGTLVTAGGRDNFYSVVY
PHPTPFYDQINVRAMKVASALKIEPVAFYPAYYEAVDDADIKDIAHMVTNNIKIDQPHRL
RIPHQRDNAVNGRRHLLEALKAFSVRMDVPVTAAMASTTQDTIIEACTWRWHELPPALPK
MADDEPATLMKLAVAGLRKRLTTKEFGYTPPASEHRVYVDRLKYEMDTLTRLGFCGYFLM
VRDLMNHSRETGIPVGPGRGSSAGSLVAWCIGITNVDPIRHGLLFERFINPERLDLPDAD
LDFSQARRHEVIEYLNERYGEDYVAGIPNFTYLGAASALRDTARIYGVDAADMAVSKEFK
NLEDDSLSLEELREQLASLDKYATKYPEAFKAACKLQSLMRGFGRHAAGMIVAGVPLVER
TPVELRGNARCIAFDKRYCEAMGLIKLDVLGLATLDLLDSAKRYIKESTGEDINLDAIPL
DDRKVLDGFAAGYTQGVFQLESGPMRKLLKDLGGGIEPMSFKTVVATTALFRPGPIQSGM
LDDYVSVAKGFMAPQSLHPVLDELTAETNGVILYQEQTMNATRLLAGFTMAEADGVRKAI
GKKDMEKMKSMGEKFVVQAQAGWIDVEMEDGTTQRIHRAEHFKCEDGALRTVEEALEAGV
KLPMAAVRVTGSQPGLSETKAKEIWDAFEKNGAYQFNKSHPVAYSLISYQSMWLKTHYPA
EFFAAALTILGEDKHQGLVKDALTYGIHVLPPDVNVSSNRIEIRTLEDGSQVLYAPFSAV
KGCSENGCQAIMRAREKVGGKFESLEQFEEAVEKRACACNSRVRESLQKVGAFASIEPGS
LPATDPERLRDQAELMGNLVIDAVKASRPFEMNPKRSAEVNVLMTRMAAEMGLGDDLIRP
SIGIKPKIMVILDNANGNDGRTGYFMENGYDDFKAKLLTAGDLRMGDLYVTGVCKKVKDK
EKDYTKDEIGQFTDFMREEINLVRPTYVLTCGSRATSLFNNKSKPSDLVGRKEYLPELDV
TVFYGFNPNILYFRPEEGEKLEAILAEVAETISK
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctctgatggtcagaactgacttctccctgggagagtcagctctaaaagcagaa
aacgcggtgaaaatcgcgagagacgctggctacactgctgtcatttccgctgacagcatg
aacattgccagtgtgattcccctgcagcgtgccgctggcgacgatatggcggttatttgt
ggtgttaagctgaatgtggtcgacgatccgacatacgagcaccgcgcccgccttgcgaaa
gaatcagagagatgtatggaatcattggtgcgtgatcgcagctactgcttcacggcactg
ataaagaatgagcaaggttatcgcgacgtgtgcgaactgatgaccttagcgaacaagcgc
gagcaattctactttgtcccgcgtctggcgctcgaccaactggcggccgcgtatgccaaa
ggcaacatcatcctgctgacgtccgacattggcagtgtattccagcgccgggacttcgca
aagattatcgggacgctggtcacagctggaggacgcgataacttctacagcgtggtttat
ccgcaccctaccccattctacgaccagattaacgtccgggcgatgaaagtagcgagcgca
ctgaaaatagagccagtggcgttctatcccgcttattacgaagcggtcgacgacgctgac
attaaagacattgcgcacatggttacgaacaacatcaaaatcgaccagccgcatcgtctg
cgtattccccaccagcgagataacgccgttaatggtcgccgccatctccttgaagcgctg
aaagccttctccgttcgcatggatgtaccggtaacagctgcaatggcctcaacaacgcag
gacaccattatcgaagcctgcacatggcgctggcatgaattgccaccagcactgcccaag
atggcagacgacgagcctgcaacgctgatgaagctggctgtcgcggggctgcgcaagcgt
cttactaccaaagagtttggctacacaccaccggcttctgagcaccgcgtgtatgttgat
cgtctgaagtacgaaatggacacgctgacccgtctgggcttctgtggctacttcctgatg
gtgcgcgacctgatgaatcacagccgtgaaactggcattcctgtcgggccaggtcgtggt
tcctctgccggttctctggtggcgtggtgcatcggcataaccaacgtcgatcctatccgt
cacggtcttctgtttgagcgtttcatcaaccctgaacgtctcgacttaccggatgcggat
ctggacttcagccaggcacgtcgccatgaggtgatcgagtatctgaatgaacgctatggc
gaagattacgttgccggtattccgaacttcacctatctgggcgcggcttctgcgctgcgt
gacaccgcacgtatttacggtgtcgatgctgcggatatggcggtatccaaagagttcaag
aatctggaggacgatagcctgtcgctggaagagctgcgcgagcaactggccagcctggac
aaatacgccacgaaatacccggaagcgttcaaagcggcgtgtaagctgcaaagcctgatg
cgtggttttggtcgccacgctgcggggatgatcgtcgctggcgttccactggtagagcgc
acgcccgtcgagctgcgtggcaatgctcgctgtattgcattcgataaacgttactgcgag
gcgatggggctgattaagctggacgttctcggtctggcaacgctcgatctgttggatagc
gcgaaacgctacatcaaagagagtaccggggaagacatcaatctcgatgctatcccactg
gacgatcgtaaggttctggatgggttcgctgcagggtacacgcagggcgtattccagctg
gagtccggtcccatgcgcaagctgcttaaagatctgggcggtggcatcgagccaatgagc
ttcaaaaccgttgtcgccacgaccgcactcttccgacctggcccgattcaatccggcatg
ttggacgactatgtctccgtggccaaaggcttcatggctccacagtcgctgcacccggta
ctggacgagcttaccgcggaaaccaacggcgtgattctgtatcaggaacagacgatgaac
gcgacacgattgctggccggtttcacgatggccgaagcagatggtgtacgtaaagcgatc
ggtaaaaaggatatggaaaagatgaagagcatgggcgagaagttcgtcgttcaggctcaa
gctggttggatcgacgttgagatggaagacggcaccacgcagcgtattcaccgcgcggaa
cacttcaaatgtgaggacggcgcactgcggacggtcgaagaagcgctggaggcaggtgtg
aaattgccgatggctgctgtacgcgttacagggtcacaaccgggcttgtctgagacgaaa
gctaaggagatctgggatgccttcgagaagaacggtgcgtatcagttcaacaaatcacat
cccgttgcctactcgctgatcagctatcagtctatgtggttaaagacacattaccctgct
gagtttttcgctgctgcgctcaccattctgggcgaggataagcaccaggggctggttaag
gatgcgctgacctatggcattcacgtattgccaccagacgttaacgtgtcatctaaccga
attgagatccgcacgctggaagacggcagccaggttctgtatgcgccattctctgctgta
aaaggctgctctgagaatggttgccaggccatcatgagagcgcgtgagaaagttggcggc
aaattcgagtcacttgagcaatttgaggaagcggtcgagaagcgtgcgtgtgcgtgtaac
agccgggtacgcgagtcactgcaaaaagtaggtgcgttcgcatcgattgagcctggcagt
ctgccagcgacagatccggaacggctgcgcgaccaggctgaattgatgggcaatctggtg
atcgacgctgtaaaagcctctcgaccgttcgagatgaaccctaaacgctctgccgaagtg
aatgtactgatgacacgcatggcggctgaaatgggtctgggagacgacctgatacgccca
agcattggcattaagccgaaaatcatggtcattctggacaacgcgaacggcaatgatggg
cgtactggctacttcatggagaacggctacgacgactttaaggcgaagttgcttactgca
ggcgatttgcgcatgggagatctctacgtcaccggcgtgtgcaaaaaggtgaaggacaaa
gagaaggactacaccaaagacgagataggccagttcaccgactttatgcgtgaagagatc
aatctggtgcgtccgacctatgtgctgacgtgtggcagccgggcgacgtcactcttcaac
aacaagagcaaaccatccgacctggttggacgcaaagagtatctgccagagctggatgtg
accgttttctacggatttaacccgaacattttgtactttcgcccagaggaaggcgaaaag
ctggaagcaattctggcagaggtagcggagacaattagcaaatga
DBGET
integrated database retrieval system
