Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_0043
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Entry
YPK_0043 CDS
T00665
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
ypy
Yersinia pseudotuberculosis YPIII (serotype O:3)
Brite
KEGG Orthology (KO) [BR:
ypy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ypy03012
]
YPK_0043
Translation factors [BR:
ypy03012
]
Eukaryotic type
Elongation factors
YPK_0043
Prokaryotic type
YPK_0043
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_2nd_SelB_bact
WHD_1st_3rd_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ACA66357
LinkDB
All DBs
Position
47410..49383
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AA seq
657 aa
AA seq
DB search
MIIVTAGHVDHGKTTLLQAITGVNADRLPEEKQRGMTIDLGYAYWPLPDGRIMGFIDVPG
HEKFLANMLAGVGGIDHALLVVACDDGVMAQTREHLAILRLSGRPALTVALTKADRVDDE
RIAQVHQQILQELVAQGWSAEQISLFVTAAVTERGIGELREHLAQCHQQRDPKGRLQRRF
RLAIDRVFSVKGAGLVVTGTALAGQVAVGDTLWLTGGDCPVRVRGIHAQNQPAQQAQAGQ
RIALNISGDISKQQINRGDWLLAQPPLPPVDRVLVTVDADTPLQHWQPLHLYHGARHITG
RFSLLGHQQLIDDQQPLIDDQQPLIGHQQIINNQSTSGGHSSQILAELLLDSPLWLVEND
RVILRDIGAKKTLGGARVIHLAVPSRGKRQPAYLAWLTALAQATSDREVLDLHLAQGPVS
VRTFSWARQLTDNEMAALLAATDTVVAGDIALSHSHAQQAQQTLLHVLALYHQQHGDQLG
LGRARLRRMALPTLDEGVVFRLIDNLLAEGALHNTRGWLHLPEHGLAFTEQEQIGWQQAA
PYFVDDPWWVRDLAAELQAAEGEMRSLLRKAAQLGYITAVVTDRYYLSQRIEQLADLVRE
LDSRQGSVSAADFRDRLGIGRKLAIQILEFFDRSGFTRRRGNGHILRDSGLFSATGS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtcaccgcaggccatgtcgatcatggcaaaaccacacttttacaggccatt
accggggtcaatgcggatcggttgccggaagagaagcagcgggggatgaccatcgatctg
ggctatgcctactggccacttcctgatggccgtatcatgggttttattgacgtccccggt
catgagaagtttttggcgaacatgttggcgggggtgggcggtattgatcacgctctgttg
gtggtggcctgtgatgatggcgtgatggcgcagacccgtgaacatctggcgattttgcgg
ctgagtggtcggccagcgctaacggtggcattgaccaaagcggatcgggttgatgatgag
cgcattgcacaggtccatcagcaaattttgcaggagttggtggcacaaggctggtcagcg
gagcagatcagtctgtttgtcacggcggccgtcactgagcgtggtatcggtgagttacgt
gagcatctggcgcaatgtcatcagcaacgtgacccgaagggccgattacagcggcgtttt
cgtctggccattgaccgggtattcagcgtaaaaggggctggcttagtggtgacggggacc
gcgttggcgggccaggtggcggtaggcgataccctgtggttgactggcggtgattgcccc
gtgcgggtgcgaggtattcatgcccagaaccaaccggcacagcaggcgcaagccggccag
cgcattgccctgaatatcagcggtgatatcagtaagcagcaaatcaaccgcggtgattgg
ttattggcgcagccaccgttgccaccggtggatcgggtgctggtaaccgttgatgccgat
acgccgttacaacactggcagcccttacatctgtatcatggggctcgccatattacgggc
cgtttttcactgctaggtcaccagcagttaattgacgaccaacaaccgttaattgacgac
caacaaccgttaatcggccatcaacaaatcataaataatcaatccacatcaggcggtcat
tcctctcagattctggccgagttgctgctggacagccctctgtggctggtagaaaacgac
cgggtgatcttgcgtgatatcggggcgaagaaaaccttgggtggcgcacgggtgattcat
ctggcggtgccatcacgtggtaaacggcaaccggcgtatctggcttggttaaccgcactg
gcccaggcgacgagtgaccgagaggtgttggatttacatttggcgcaagggccggtctcg
gtgcgcacatttagttgggcgcgccagcttactgacaatgagatggcggcattactggcg
gcgaccgatactgtcgtcgccggggacattgcgctatcacattctcacgcacagcaagcg
caacagaccctcttacatgtactcgccctctatcaccaacagcatggcgatcagttgggg
ttagggcgggcgcgtttgcgacgtatggctttaccgacgctggacgaaggggtggtattc
cgtctgattgataacttgctggcggagggagcgttacacaacacccgtgggtggttacat
ctgccagaacatggtttagcgtttactgagcaagagcagatagggtggcaacaagcggca
ccttactttgttgatgacccttggtgggtgcgtgacttagcggccgagttgcaagctgca
gagggtgaaatgcgcagcctattacgcaaagcggcgcaactgggttatatcactgcggtt
gtgacggatcgttattatctgagccaacgcattgagcagcttgctgatttggtacgtgag
ttagatagccgccaggggagtgtcagtgccgcagatttccgtgatcgactcggtattggt
cgcaaactggcgatccaaattcttgaattctttgaccgcagtggtttcacccgccgccgg
ggtaatggccatatattgcgagatagcggcctgttttctgcgacaggttcttga
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