Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_1105
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Entry
YPK_1105 CDS
T00665
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ypy
Yersinia pseudotuberculosis YPIII (serotype O:3)
Brite
KEGG Orthology (KO) [BR:
ypy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypy01011
]
YPK_1105
Enzymes [BR:
ypy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
YPK_1105
Peptidoglycan biosynthesis and degradation proteins [BR:
ypy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
YPK_1105
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM_RLK
NMB0315_dom_I
LysM1_NFP_LYK
DUF3071
LysM_OapA
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ACA67403
UniProt:
A0A0H3B0P0
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All DBs
Position
complement(1244446..1245864)
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AA seq
472 aa
AA seq
DB search
MIARLLSNHIDTHMKTKAILLASVLLVGCQTSKQDAQAPEQHAQSLSSAGEAGEYTNSTR
EGSARWLESESSYAQQDLWNFIKDELKMKVPENSRIREQKQKYLKNKSYLHDVTLRAEPY
MYLIVEQIKKRKMPMELVLLPIVESAFDPHATSSANAAGLWQIVPSTGRNYGLKQNQWYD
GRRDVVASTKAALDILERLNKMFNGDWLLTVAAYNSGEGRVMQAIKANKAKGKPTDFWAL
SLPRETSIYVPKMLALGDLLKNSKKYGITLPETDKDRALARVDVDQQIELTQAAEMAGMS
LTKLKSFNSGYKRNVTAPDGHGPRYIMLPKAHAEQLKDSLADTDITAVQPTKLATNSTKS
ASSSQYKVRPGDTLSTIAKRLNIKTSDLQSWNNLRAKSTLKVGQTLQLASNTTSKSITYQ
VRKGDSFASIAKRHGVNTDDVMRWNSVVSKANNLQPGLKLTLFVNDKSTPEA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgattgctcgtcttttaagcaaccacattgacacacacatgaagaccaaagcgatactt
ctcgcctcagtcttgcttgtcgggtgccagacgtccaagcaggacgcgcaggctcccgaa
cagcatgcacagagtttgtcttcggcaggtgaagcaggagagtacacaaatagcacccga
gagggttcagcgcgctggctggaaagtgaaagcagctacgcgcagcaagatttgtggaac
ttcatcaaagacgagctgaagatgaaggttccggagaattcccggatccgtgaacaaaaa
cagaaatacttaaaaaataagagctatctccacgatgtaacattacgggcagagccgtac
atgtacctgatagtcgagcagattaagaaacgtaagatgccgatggaactggtactgcta
cccatagtggagagcgcttttgacccacacgcgacatcatccgccaatgccgcagggcta
tggcagattgtgccaagtacggggcgaaattatggcttgaagcaaaatcaatggtatgac
ggtcgcagagatgttgttgcctctaccaaagcagcgcttgatatattggaacgcttgaac
aaaatgtttaacggtgactggttattgacagtcgcagcttataacagcggtgaaggccga
gttatgcaagcgataaaagccaataaggcaaagggcaaaccgaccgatttttgggcattg
tcgcttccgcgtgaaacgtcaatttatgttccaaaaatgctggccttgggtgatttactc
aagaacagcaaaaagtacggtataaccttgcctgagactgacaaagaccgtgcgctggct
cgcgttgatgtcgatcaacaaatagagctaactcaggcagctgagatggcggggatgtca
ctgacaaagctgaaatcctttaattctggctacaaacgcaatgtaacggcaccggatgga
catggtccccgttatattatgttaccgaaagcccatgctgagcagttgaaagactcattg
gcagatactgatattactgctgttcaacctacaaaattggcaacgaacagtacaaaatca
gcatcaagttcgcagtataaagttcgcccaggcgataccttatctacgattgccaagcgg
ttgaatatcaagaccagcgatttgcagagttggaacaacttacgtgccaagagcacctta
aaagttgggcaaaccctgcaactggcaagcaatacaaccagcaaaagtatcacctatcaa
gttcgtaaaggtgattcctttgccagtattgccaagcgtcacggtgtaaataccgacgat
gtgatgcgatggaattcggtagtcagcaaagctaacaatttacaaccaggcttgaaattg
acgttattcgttaacgacaaatcaaccccggaggcgtag
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