Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_1173
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Entry
YPK_1173 CDS
T00665
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ypy
Yersinia pseudotuberculosis YPIII (serotype O:3)
Pathway
ypy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YPK_1173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypy03400
]
YPK_1173
Enzymes [BR:
ypy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
YPK_1173
DNA repair and recombination proteins [BR:
ypy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YPK_1173
Prokaryotic type
YPK_1173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACA67471
UniProt:
B1JRB1
LinkDB
All DBs
Position
complement(1310736..1311422)
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AA seq
228 aa
AA seq
DB search
MSPSLTWHDVIGQEKEQPYFKDTLAYVAAERRAGKTIYPPQKDIFNAFRLTELDQVKVVI
LGQDPYHGPNQAHGLSFSVLPGVPAPPSLGNIYKELVTDIPGFQRPNHGFLQSWAEQGVL
LLNTVLTVEAGKAHSHANLGWETFTDRVIAALNEHREGVIFMLWGSHAQKKGRIINTERH
YILKAPHPSPLSAHRGFLGCKHFSQANQLLQQQNQQPIDWQPKLPAVE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtccccctcccttacttggcacgatgtaatcggccaagaaaaagaacaaccgtatttt
aaagatacgctggcctatgtggcagcagaacgccgtgcgggtaagaccatctatccacca
caaaaagatatatttaacgcttttcgcctgaccgaactggatcaagtaaaagtcgtcatt
ctggggcaagatccgtatcacggccccaaccaggctcatggattatcattttcggttcta
cctggtgttcctgcccccccttcattggggaatatatacaaggaactggtcactgatatt
ccaggattccagcgccctaaccacggttttttacaaagctgggccgagcaaggcgtttta
ttacttaatacggtcctgacggtagaagcgggcaaagcccactctcatgctaaccttggc
tgggaaacctttacggatagagtgattgctgcgttgaatgaacaccgagaaggtgtgatt
tttatgttgtggggatcacatgctcagaaaaaaggccgcattattaatactgagcgccat
tatattttgaaagcaccccatccatcacccttgtcagcacaccgtggttttctgggctgt
aagcacttttcgcaagctaatcaattactgcaacaacaaaatcagcagcctattgattgg
caacctaagctgccagcggtggagtaa
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