Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_2143
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Entry
YPK_2143 CDS
T00665
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ypy
Yersinia pseudotuberculosis YPIII (serotype O:3)
Pathway
ypy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YPK_2143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypy03400
]
YPK_2143
Enzymes [BR:
ypy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YPK_2143
DNA repair and recombination proteins [BR:
ypy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YPK_2143
RecFOR pathway proteins
YPK_2143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_22
nSTAND3
AAA_3
Mg_chelatase
AAA_16
AAA_14
Sigma54_activat
AAA_2
AAA_18
Rad17
RNA_helicase
AAA_28
ABC_tran
AAA_17
NTPase_1
Bac_DnaA
NB-ARC
TsaE
AAA_24
Sigma54_activ_2
AAA_33
TetR_C_1
NACHT
Parvo_NS1
IstB_IS21
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ACA68429
UniProt:
B1JLL0
LinkDB
All DBs
Position
complement(2374118..2375122)
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AA seq
334 aa
AA seq
DB search
MIEADRLISAAVINDEESIDRAIRPKLLTEYVGQPHVREQMEIFIQAAKQRGDALDHVLI
FGPPGLGKTTLANIIANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLEHIVSRSAKCLGLELTPEGAHQLARRSRGTPRITNRLLRRVRDFAEVRADG
AINGEVAMKALDMLNVDAEGFDFMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFIQRTPRGRIATNHAYKHFGITREE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagaccgtctaatatcggccgcagttatcaatgatgaagagagcattgac
cgggccatccgccctaagctactgactgaatatgttgggcaacctcatgtccgtgaacag
atggaaatcttcattcaggcagcaaaacaacgcggtgatgcactcgatcacgtgctgata
tttggccctccgggtttgggtaaaaccacattggcgaacattattgccaacgagatgggg
gtcaatctgcgcacaacgtccggtccggtattggaaaaggccggtgatttagccgccatg
ttgaccaacctggagccgcatgatgtgctatttattgatgagatccaccgtttgtcaccg
gtagtagaagagattctttacccggcaatggaagattatcaattggacatcatgattggc
gaaggccccgcggctcgctcaatcaaacttgatttaccgccgtttaccctgattggtgcg
accacccgagcgggttcactaacatcacctttgcgtgatcggtttggtatcgtgcagcgg
ctggagttttatcaggtggctgatctagagcatattgtttcacgcagtgctaagtgcttg
gggctggaactcacgccggagggggcacaccagttggcacgtcgctcaagaggaacgccg
cgtattaccaaccgcctattgcgccgtgtacgtgatttcgccgaagttagagccgatggt
gccattaacggtgaggtcgcaatgaaagcgctggatatgcttaatgtcgatgctgaaggg
ttcgattttatggaccgtaaattgttgttagcggttatcgataaatttatgggcgggcca
gtagggctggataatctggcggcagcgattggtgaagagcgggaaaccatcgaagatgtt
ctggagccgtatctgattcaacaaggctttattcagcgtactcctcgtgggcgaattgcc
acaaatcacgcgtataaacattttggtattactcgggaagaataa
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