Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_3463
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Entry
YPK_3463 CDS
T00665
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ypy
Yersinia pseudotuberculosis YPIII (serotype O:3)
Pathway
ypy00550
Peptidoglycan biosynthesis
ypy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ypy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YPK_3463
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ypy01003
]
YPK_3463
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypy01011
]
YPK_3463
Enzymes [BR:
ypy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
YPK_3463
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
YPK_3463
Glycosyltransferases [BR:
ypy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
YPK_3463
Peptidoglycan biosynthesis and degradation proteins [BR:
ypy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
YPK_3463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ACA69730
UniProt:
A0A0H3B5G7
LinkDB
All DBs
Position
complement(3803428..3805908)
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AA seq
826 aa
AA seq
DB search
MSGDDREPIGRKGKKAQPKAAPKRPLRRRRDEDEYEEDYDEEQNDDDYDDEEEPMPRKVA
SRPPRKKRRWLGLLIKLFLIGAVALAIYGVYLDSQIRSRIDGKVWQLPAAVYGRMVNLEP
GMSYSKKEMIALLEGMQYRQVSRMTRPGEFTVQNDSIDILRRPFDFPDGKEGQIRARLLF
KNDRLAQIQNLDNQRDFGLFRLDPKLITMLQSPNGEQRLFVPRAGFPDLLVDTLLATEDR
HFYEHDGVSPYSIARAVVANLTAGKAVQGGSTLTQQLVKNLFLTNERSLVRKLNEAYMAL
LMDYRYSKDRILELYLNEVYLGQSGGDQIRGFPLGSLYYFGRPVDELSLDQQAMLVGMVK
GASLYNPWRNPKLALERRNLVLRLLQNQGIIDAELYTMLSARPLGVQPKGGVITPQPAFM
QMVRQELQQKLGNKVNDLSGVKIFTTLDPVSQDAAEKAIEDGVPALRAARNMNDLEAAMV
VVDRFSGEVRAMVGGSQPQFAGFNRAMQARRLVGSLAKPPTYLAALSEPDKYRLNTWLSD
QPLSLKLSNGSLWQPKNYDRQFRGQVMLMDALVNSLNIPTVNLGMSVGLDQISATLQRLG
IPKSVINPVPAMLLGAIDLTPVEVAQEYQTIASGGNRAPLSAVRSVIAEDGTVLYQSFPQ
AERMVPAQASYLTLYAMQQGVVRGTSRSLSAKFGKYNLAAKTGTTNDLRDSWFAGIDGKE
VTIAWIGRDNNGPTKLTGASGALTLYRRYLENQTPLPLILQPPEGISQMNIDSAGNFVCG
EGSGMRVIPVWTENPQALCQGSAPTQDPTKPNDDGVADWIKEMFGQ
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggacgatcgtgagccgatagggcgcaagggtaagaaagcccaacccaaagca
gcaccaaaacgtccactgcgccgtcggcgtgatgaagatgaatacgaagaagattatgac
gaagaacaaaatgatgatgattatgatgacgaggaggaaccgatgccaagaaaagtagca
tcacgcccacctcgcaagaaacgccgttggctcgggttgttgatcaaactgttcctgatt
ggggccgtggctttggcgatctatggggtttacctcgattcgcaaatccgcagccgtatt
gatggcaaagtctggcaattaccggctgccgtgtatggccggatggtcaatcttgagccg
ggtatgtcctacagcaaaaaagagatgatcgccttgctggaagggatgcaataccgtcag
gtcagccgcatgacccgccctggggagttcacggttcagaacgacagtatcgatatcttg
cgccggccgttcgatttccctgatggtaaagaaggccaaattcgcgcccgtttactgttc
aaaaatgatcgtctggcccagattcaaaacctggataatcagcgtgatttcgggctattc
cgcctcgatcccaagttgattaccatgctgcaatcacctaacggtgaacagcgtctgttt
gttccgcgcgccgggttccctgatttgctggtggacaccttgctggcgactgaagaccgc
catttctatgagcatgatggcgtcagcccgtattccattgctcgagccgtggtcgctaac
ctgacagccggtaaagcggtgcaggggggcagtacgctgacgcaacagttagtgaaaaac
ctgttcctgaccaatgaacgttcgctggtacgtaaacttaacgaggcctatatggccctg
ttgatggattatcgctacagcaaagatcggatcttggaactctatctgaacgaagtctat
cttggtcagagtggtggtgaccaaatccgtggcttcccgctgggtagcttgtattacttt
ggccgcccggttgatgaattgagtctcgatcagcaagccatgttggttggcatggtgaaa
ggggcctcactgtataacccgtggcgtaatcctaagctggcacttgagcggcgtaatttg
gtcctgcgcttgttgcagaatcaagggattatcgatgctgagctttacaccatgctcagt
gcccgtccgctgggggtgcagccgaaaggcggagtcatcacacctcaacctgcttttatg
cagatggtgcgccaggagctgcaacagaagttgggtaacaaggtcaatgatctgtctggc
gtgaagatcttcaccaccttggatccggtttcacaagatgccgcagaaaaagccatcgaa
gacggtgttccggcgctgagagccgcccgtaatatgaatgacctggaagcggcgatggtg
gtggttgaccgtttcagtggcgaagtgcgtgccatggtgggcggttcacagccacaattt
gccggttttaaccgtgcgatgcaggcccgccgtttggtggggtcacttgccaaaccacca
acctatctggccgcgttgagtgagccagataagtaccgcctcaatacctggctttcggac
caaccgctgtcgcttaaattatcgaacggttcattgtggcagccgaaaaactatgatcgc
cagttccgtggtcaggtcatgttgatggatgcgttggtgaactcactgaacatcccaaca
gtcaatttggggatgtcagtgggcttagatcagatcagcgccacactgcaacgccttggg
atcccgaaatcagtcattaatccggtcccagccatgttattgggggcgattgacctgact
ccggttgaagttgcgcaggagtatcagacgatcgccagtggtggcaaccgtgcaccgttg
tcggctgtgcgttcggttattgctgaggatgggaccgtgctgtatcagagcttcccacag
gcagaacgtatggtgcctgcacaagcttcttacctgacgctgtatgcgatgcagcaaggg
gttgtccgtggtacatcacgctctctctcggcgaagttcggcaaatataatctggcggcc
aaaaccgggacaaccaacgatctgcgtgacagttggtttgccggtattgatggcaaagaa
gtgaccattgcctggattgggcgcgacaataacggcccgactaagctgaccggggccagc
ggcgcgctaaccttgtatcgccgctatctggaaaaccaaacgccgttgccgctgattctg
caaccgccagaaggcattagccaaatgaacattgattcggcggggaacttcgtctgtggt
gaagggagcgggatgcgcgtcattcctgtttggaccgaaaatccgcaagctttgtgtcag
ggatccgcacccactcaagaccccacaaaacctaacgatgatggtgttgccgattggatc
aaagagatgtttggccaataa
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