Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_3532
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Entry
YPK_3532 CDS
T00665
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ypy
Yersinia pseudotuberculosis YPIII (serotype O:3)
Pathway
ypy00061
Fatty acid biosynthesis
ypy00071
Fatty acid degradation
ypy01100
Metabolic pathways
ypy01212
Fatty acid metabolism
ypy02024
Quorum sensing
ypy04146
Peroxisome
Module
ypy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ypy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
YPK_3532
00071 Fatty acid degradation
YPK_3532
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
YPK_3532
09145 Cellular community - prokaryotes
02024 Quorum sensing
YPK_3532
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ypy01004
]
YPK_3532
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ypy04147
]
YPK_3532
Enzymes [BR:
ypy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
YPK_3532
Lipid biosynthesis proteins [BR:
ypy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
YPK_3532
Exosome [BR:
ypy04147
]
Exosomal proteins
Exosomal proteins of breast milk
YPK_3532
Exosomal proteins of breast cancer cells
YPK_3532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
PDDEXK_12
OKR_DC_1_C
Motif
Other DBs
NCBI-ProteinID:
ACA69799
UniProt:
A0A0H3B723
LinkDB
All DBs
Position
complement(3881097..3882902)
Genome browser
AA seq
601 aa
AA seq
DB search
MIHKLHQYHLVRRLRQQVSDRSELVAFREWSPEGEKQLNWQQIDEHVTRISTALLSLGAA
IQERIGIFANNSMAWSLVDLAILQLRGVSVPLYATNTAAQAAYIVNDADVRILFVGEQSQ
FDIAITLQPLCPQLAHIIVLDPSVDLRGCEYAQHLADFEQQQQPDTVQQHLLTTRIEACD
LDDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTPQDVSLSFLPLSHVFERAW
SFYVMHTGAQNVYIRNTDWVRSAMQAVKPTVMCAVPRFYEKVFSAINDKVALAKWHQRVL
FHWAVGCGERKFKRLQQGRPLPWLSEQMYTLADRLVLRKLRGVLGGRVRFLPAAGARLDD
NIILFFQAIGVNIKYGYGMTETCATVSCWEEQNFRFGSIGKPLPGIDVRLGAENEIQVRG
PIVMRGYFKKPQETLEAFTEDGWLKTGDAGALDAQGHLFITERLKDLMKTSGGKYIAPQM
IEGTLGQDRFIEQVAIIADTRKFVSALIVPSFESLEEYARSINLKYHDRLELLRHSHIVN
MFEQRLKEIQKELALFEQVKKFTLLPQAFTMETGELTPTMKLRRKIILQRYQNEIDLMYS
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgattcataaattacatcaatatcacctggtacgtaggttgcgtcagcaagtcagtgac
cgttcagagctggtagcctttcgtgaatggtcaccagagggtgaaaagcagctcaactgg
cagcaaattgacgagcatgtcactcggatttctactgcattgctctctttgggggctgca
atacaagagcgcattggcatctttgctaataacagtatggcgtggtcacttgtcgatctg
gctattttacagttacgtggcgttagtgtccccttgtatgccaccaataccgccgctcag
gcagcctatatcgtcaatgatgctgatgtgcggattttgtttgtcggtgagcaatcccaa
tttgatattgccatcacgctgcaacctctctgcccgcaactggcccatatcattgtattg
gatccttcggtggatttacgtggctgtgagtacgcccagcacttggctgactttgagcag
caacagcaacccgataccgtgcaacagcacctgttaaccacgcgcattgaggcctgtgat
ttagacgatctgtttacgctgatttatacgtcgggtaccacgggggagccaaaaggcgtg
atgttggattaccgtaatatggcagctcaactctatttgcatgaccagcggttaaccctc
acaccacaagatgtgtccctcagttttttgccgttatctcatgtttttgaaagagcctgg
agtttctatgtgatgcataccggtgctcagaacgtctatatccgtaatacggattgggtg
cgctctgctatgcaggcagtaaaaccaacggtgatgtgcgcggtgcctcgcttctacgag
aaagtattcagcgcgattaatgacaaagtcgccttggcaaagtggcatcaacgcgtgcta
ttccactgggcagtggggtgcggtgaacgtaaattcaaacggttgcagcaggggcggcca
ttaccttggctctcagagcagatgtacacactggcagaccgtttggtattgcgcaaatta
cgcggtgtgttaggggggcgggtacgttttctgcccgcggctggcgcacggttagatgat
aatatcattctgtttttccaggcgattggggtcaatattaaatacggctatggcatgact
gaaacctgtgccacggtttcttgttgggaagagcaaaacttccgctttggttctatcggc
aagcccttaccgggtattgatgtccgcttaggggcagagaatgaaattcaggtgcgtggg
cctatcgtgatgcgtggctatttcaaaaagccacaagagacgctagaagcctttaccgaa
gacggatggcttaagacgggggatgcgggtgctctggatgctcagggtcatctgtttatt
accgaacgtctgaaagacctgatgaaaacgtcgggggggaaatatattgccccacaaatg
atcgaaggcacactcggacaggatcgttttattgagcaggtagcgattattgcggatacc
cgcaaatttgtatcagcgttgattgtcccgagttttgaatcgctggaagagtatgcccga
tccatcaacttgaaatatcacgatcggttggagctattgcgccatagccacattgttaac
atgtttgagcaacggctgaaagagatacaaaaagagctggctctgtttgagcaagtaaaa
aagtttacgctgttgcctcaggcgttcactatggaaaccggtgagttaacgcctacgatg
aagttgcggcggaaaatcattcttcaacgctatcagaatgaaattgacttgatgtatagc
gattaa
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