Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_3799
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Entry
YPK_3799 CDS
T00665
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
ypy
Yersinia pseudotuberculosis YPIII (serotype O:3)
Pathway
ypy02024
Quorum sensing
ypy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ypy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YPK_3799
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YPK_3799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypy03019
]
YPK_3799
03036 Chromosome and associated proteins [BR:
ypy03036
]
YPK_3799
Messenger RNA biogenesis [BR:
ypy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
YPK_3799
Chromosome and associated proteins [BR:
ypy03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
YPK_3799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ACA70066
UniProt:
B1JMN9
LinkDB
All DBs
Position
complement(4186301..4186606)
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AA seq
101 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNTPSGSTNNYHGSNPSAPQQPQQDSDDAE
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttgcaagatccgttcctgaacgcattgcgtcgtgaacgggtt
ccggtttctatttatttagtgaatggtattaaactgcagggccaagttgagtcttttgat
cagtttgtcattctgttaaaaaatacagtcagccagatggtttataagcacgccatctct
actgttgtgccttctcgtccggtttcgcatcacagcaatactccgagcggtagcaccaat
aattatcatggtagtaatccgtctgcgccgcaacagccgcagcaggacagtgatgacgct
gaataa
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