Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_4011
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Entry
YPK_4011 CDS
T00665
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ypy
Yersinia pseudotuberculosis YPIII (serotype O:3)
Pathway
ypy00300
Lysine biosynthesis
ypy00470
D-Amino acid metabolism
ypy01100
Metabolic pathways
ypy01110
Biosynthesis of secondary metabolites
ypy01120
Microbial metabolism in diverse environments
ypy01230
Biosynthesis of amino acids
Module
ypy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ypy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YPK_4011
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YPK_4011
Enzymes [BR:
ypy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
YPK_4011
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ACA70274
UniProt:
B1JPE1
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All DBs
Position
complement(4423412..4424236)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKREISVSTQTGRMILSVTEDEQVCVNMGE
PDFEPQTVPFRAAKAEKTYILRAAEHTVLCGVVSMGNPHCVMQVDDVSVANVALLGPVLE
NHERFPERANIGFMQVVSRDHIRLRVYERGAGETQACGSGACAAVAVGVVQDLLNENVHV
ELPGGSLHIRWQGPGHPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtcttggcaacgactttatggttgttgatgcagtgact
caaaatgtttacttttcgccggaattgatccgccgattagcagaccggcacacgggtgtg
ggctttgatcagatgctggtagttgagccgccctacgaccccgagctggattttcactac
cgtatttttaatgccgatgggagcgaagtctcccagtgtggtaatggcgcacgctgcttt
gcccgttttgttcgtttgaaagggctgaccaataagcgcgagatcagcgtcagtacgcaa
actggccgtatgatcctaagcgtgacagaagatgaacaggtttgcgtcaatatgggcgag
cctgattttgaaccgcaaactgtcccttttcgcgccgccaaagcggagaaaacctatatt
ttacgcgccgcagagcatacggtgctgtgtggcgtggtgtcgatgggcaacccccactgt
gtgatgcaggtcgatgatgtttcggttgccaacgtggcgttgctcggtccagtattggaa
aaccacgagcgtttccctgagcgggcaaatatcggctttatgcaggtcgtcagtcgcgac
cacattcgtttacgggtgtatgagcgtggggccggtgaaacacaagcctgtggcagtggt
gcatgtgctgcggtggccgtcggggtggtgcaagacttattgaacgaaaatgtgcatgtc
gaattgccgggcggcagtttacacatccgttggcaggggccaggccatccgttgtatatg
accgggcctgccacccatgtctatgacggatttattcatttatga
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