Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_4081
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Entry
YPK_4081 CDS
T00665
Name
(GenBank) pyridine nucleotide-disulphide oxidoreductase dimerisation region
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ypy
Yersinia pseudotuberculosis YPIII (serotype O:3)
Pathway
ypy00010
Glycolysis / Gluconeogenesis
ypy00020
Citrate cycle (TCA cycle)
ypy00260
Glycine, serine and threonine metabolism
ypy00280
Valine, leucine and isoleucine degradation
ypy00310
Lysine degradation
ypy00380
Tryptophan metabolism
ypy00620
Pyruvate metabolism
ypy00630
Glyoxylate and dicarboxylate metabolism
ypy00640
Propanoate metabolism
ypy00670
One carbon pool by folate
ypy00785
Lipoic acid metabolism
ypy01100
Metabolic pathways
ypy01110
Biosynthesis of secondary metabolites
ypy01120
Microbial metabolism in diverse environments
ypy01200
Carbon metabolism
ypy01210
2-Oxocarboxylic acid metabolism
ypy01240
Biosynthesis of cofactors
Module
ypy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ypy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ypy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ypy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ypy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
YPK_4081
00020 Citrate cycle (TCA cycle)
YPK_4081
00620 Pyruvate metabolism
YPK_4081
00630 Glyoxylate and dicarboxylate metabolism
YPK_4081
00640 Propanoate metabolism
YPK_4081
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YPK_4081
00280 Valine, leucine and isoleucine degradation
YPK_4081
00310 Lysine degradation
YPK_4081
00380 Tryptophan metabolism
YPK_4081
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
YPK_4081
00670 One carbon pool by folate
YPK_4081
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ypy04147
]
YPK_4081
Enzymes [BR:
ypy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
YPK_4081
Exosome [BR:
ypy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
YPK_4081
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox_3
GIDA
Pyr_redox
Lys_Orn_oxgnase
AlaDh_PNT_C
DAO
Acb2_Tad1_hairpin
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ACA70340
LinkDB
All DBs
Position
4504867..4506330
Genome browser
AA seq
487 aa
AA seq
DB search
MKTLNVDVAVIGGGTAGLGAYRAAKLLTPNVVMIEGGEYGTTCARVGCMPSKLLIAAAEA
VHQIEKAPGFGIHPQGKPLINGREVMDRVKRERDRFVGFVLEGVETIPAADKIQGYARFI
DDNTLQVDDHTQLTSQKIIAQRIVIATGSRPSWPASWNELGDRLIINDDVFNWDDLPESV
AVFGPGVIGLELGQALHRLGVQVKMFGVGGAVGPLTDSIVRDYAAKTLGDEFYLDPDVKV
ELMQREGDKVFIRYLDKSGRPQEIMVDYVLAATGRRPNVDKLGLENTSLILDERGVPQAD
RLTMQTNVPHIFIAGDASNQLPLLHEASDQARIAGVNAGGFPEVVPGLRRSPISVVFSDP
QIAMVGATFRELAQKFSACGCFEIGEVSFENQGRSRVMLKNKGILRIYGEQGTGRFLGAE
MMGPSAEHIAHLLAWAHQQQMTIDQMLDMPFYHPVIEEGLRTALRDLQSKLKLGADEAER
CLRCPGE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccttaaacgttgatgtcgctgttattggcggcggaacggccggactgggcgct
tatcgcgcggccaaactgttgacccccaacgtagtgatgattgaaggtggtgaatatggt
accacctgcgcacgcgtcggctgcatgccatccaaactattgattgcggcggctgaagcc
gtccaccagatagaaaaagcgcccggatttggtattcacccacaaggtaagcccctgatt
aatggccgtgaagtcatggaccgcgttaagcgtgaacgtgaccgttttgtgggcttcgta
ttggaaggcgtagagaccattcctgcggccgataaaattcaaggttatgcccgttttatt
gatgataacaccctgcaagttgatgatcacacgcagcttacttcacaaaaaatcattgcg
cagcggatcgtgattgcgacaggttcccgcccaagctggcccgcctcttggaatgagcta
ggtgaccggttgattattaatgatgacgtctttaattgggacgatctgccagaatctgtg
gcagtttttggcccaggcgttattggcttagaacttggtcaggcactgcaccggttaggt
gtccaggtaaaaatgtttggtgtcggtggtgccgttggcccgctgaccgacagtatcgtg
cgtgactacgcagcaaaaacgttgggtgatgagttctatcttgatcccgatgtaaaagtt
gagctgatgcaacgtgagggagataaagtctttatccgttatctggataaaagcggtagg
ccacaggagattatggtggactacgtcttagccgccacgggccgccgccctaatgtagat
aaattggggctggagaatacgtcactcattctggatgaacgcggagtgccgcaagcagac
cgcctgaccatgcaaaccaacgtgccgcatatttttattgcaggtgatgccagcaatcag
ttgccattactgcatgaagccagcgatcaggcacgtattgctggtgtaaatgcgggggga
ttccctgaggttgtacccggtttacgccgtagcccaatttcagtcgtgttctctgaccca
caaattgccatggtgggggcaaccttccgtgagttagcacaaaaattcagcgcttgtggt
tgctttgagattggcgaagtctcctttgagaatcaaggtcgctcgcgggtgatgctaaaa
aacaaaggcattttacgcatttatggcgaacagggcactggccgattcttaggggcagag
atgatggggccaagtgcggaacacatcgcccacttactggcatgggcgcatcagcaacaa
atgaccatcgaccagatgctcgatatgccgttttatcatccggtcattgaagaaggcctg
cgtaccgcattgcgtgatttgcaatctaagttaaagctgggcgctgatgaagcggagcgc
tgcctacgctgccctggcgaataa
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