Yersinia pestis Z176003: YPZ3_0016
Help
Entry
YPZ3_0016 CDS
T01210
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ypz
Yersinia pestis Z176003
Pathway
ypz03030
DNA replication
ypz03410
Base excision repair
ypz03420
Nucleotide excision repair
ypz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YPZ3_0016 (polA)
03410 Base excision repair
YPZ3_0016 (polA)
03420 Nucleotide excision repair
YPZ3_0016 (polA)
03440 Homologous recombination
YPZ3_0016 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypz03032
]
YPZ3_0016 (polA)
03400 DNA repair and recombination proteins [BR:
ypz03400
]
YPZ3_0016 (polA)
Enzymes [BR:
ypz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YPZ3_0016 (polA)
DNA replication proteins [BR:
ypz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
YPZ3_0016 (polA)
DNA repair and recombination proteins [BR:
ypz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
YPZ3_0016 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YPZ3_0016 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Obc1_cap
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADE62926
LinkDB
All DBs
Position
22920..25718
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLLLVDGSSYLYRAYHAFPPLTNGSGEPTGAMYGVLNMLRSLLLQYRPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRVQIEPLHQMVKAMGLPLLVVSGVEADDVIGT
LAREAEKAGHSVLISTGDKDMAQLVTPNITLINTMNNTILGPQDVCDKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLFSNLDKISTLTFRGAKTMSAKLEQNK
DVAYLSYKLATIKTDVELDVTCDELTVSPPDDKQLHQLFSRYEFKRWLADVEAGKWLDSK
KDRPTGQTSSQSFVAADTAPTAEVTAVLSQENYQTILDEKALADWIERLKAAEVFAFDTE
TDGLDTLSCNLIGMSFAVAPGEAAYLPLAHDYLDAPPQLDRDWVLATLKPLLEDDKALKV
GQNLKFDKSMLARYGIDLKGIAFDTMLESYVLDSVAGRHDMDSLAERYLNHKTITFEEIA
GKGKNQLTFNQIALEQAGPYAAEDADVTLQLHLVLWPKLQQSEGLKRVFQEIEMPLLPIL
SRIERTGVLIDQNILAAHSKELTIRLDELEKQAHELAEEPFNLASPKQLQAILYEKQKLP
ILKKTPGGAASTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAPKGYCIMAADYSQIELRIMAHL
SQDNGLLAAFAAGQDIHRATAAEVFGSPLEKVTTEQRRSAKAINFGLIYGMSAFGLARQL
GIPRGEAQRYMDLYFERYPGVLEYMERTRKQAAEQGYVTTLDGRRLYLPDIHSRNANRRK
AAEREAINAPMQGTAADIIKRAMIAVDGWLQQEPEPLVRVIMQVHDELVFEVHESVLQSA
EQKIRELMEQSMQLAVPLKVDVGVGANWDQAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattgcagaaaacccattgctccttgttgacggttcctcttacctctaccgt
gcttaccatgctttcccaccactgactaatggtagcggggagccaaccggtgcgatgtat
ggcgttctgaacatgctacgcagtctgctgctgcaatatcgaccaagtcatgttgcagta
gtttttgatgcaaaaggtaaaacgttccgtgatgaactttttgctgaatataaatcccac
cgaccgccaatgccggatgatttacgggtgcaaattgaacctcttcatcagatggttaaa
gcgatgggattgcctttattggtcgtttctggcgtcgaagctgatgatgttattggcacc
ctagctcgggaagccgaaaaagcaggccattcggtattaatcagtactggtgataaagac
atggcgcaattagttacgccgaatatcactttgatcaataccatgaataacactatttta
gggccgcaggatgtttgcgataaatatggtgtccctcccgaactgatcattgattttctc
gctctgatgggtgactcctccgataatattccgggagtacctggtgttggcgaaaaaaca
gcacaggctttattgcaaggtttgggtgggttggatacgttattcagtaatctggataaa
atatcaaccttgacgttccgtggtgcgaaaacaatgtcggccaagctagagcaaaataaa
gacgttgcttatctctcctataaattggctactatcaagacagacgttgagttagatgta
acctgtgatgagctaaccgtttctcctcccgatgataaacagttacatcagttattcagt
cgttatgaatttaagcgttggctggctgatgtcgaagccggcaaatggttggacagtaaa
aaagatcggccaacagggcaaacaagcagtcaatcttttgttgccgcagatacggcccct
actgctgaagtcaccgcagtgctttcacaagagaattaccagactattttagatgagaaa
gcattggctgattggattgagcgccttaaagccgctgaagtttttgcttttgatactgaa
actgatggccttgatacccttagctgtaacttaattgggatgtcttttgctgtcgctcca
ggtgaagcggcttatctgcctctggctcatgattacctggatgccccgccccaacttgac
cgtgactgggttctggcgaccctgaaaccacttctggaagacgataaggcgcttaaagtt
gggcagaacctcaagttcgataaaagtatgctggctcgttatggtatcgatctaaaaggt
atcgctttcgataccatgctggagtcttatgttttggatagtgttgcgggccgtcatgat
atggacagcttggcggagcgctacctcaatcataaaacgattacgtttgaagagattgcc
ggtaaaggtaaaaatcagctaacgtttaatcagattgcgttggagcaagctggcccgtat
gccgcagaggatgccgatgttacccttcaattacatttggtcttatggccaaaattacag
caaagtgaaggcctcaagcgggtattccaagaaattgagatgccgttattgccgatcttg
tctcgtattgagcggactggcgtattgattgaccaaaatatattagcggcacactcaaaa
gagctcaccatccgtttggatgagctggaaaagcaggcccatgaattggctgaagagcca
ttcaacctggcatcacctaaacagctacaggctattctttatgaaaagcaaaaattgcct
atcttgaagaaaacacctggaggcgcggcgtcaacgaatgaggaagtgctggctgagttg
gctctggattatcctttgccgaaggtgattctggaatatcgtggtctggcgaaactaaaa
agcacttacaccgacaaattgccgctaatgattaaccccgtctccggtcgggtacacact
tcctatcatcaggcagtgacagcaaccgggcgcttgtcttcccgcgatcctaacctacaa
aatatccctgtacgtaatgaagaggggcgacgtattcgccaggcctttattgcaccgaag
ggctactgcattatggcggccgactattcgcaaattgaactgcgtattatggcgcatttg
tcgcaggataacgggctgttagctgcatttgctgctgggcaggatattcaccgggcaacc
gccgcggaagtatttggttcgccattggaaaaagtgacgacggagcagcgtcgtagcgca
aaagcgattaattttggtttgatttatggcatgagtgcttttggcttggcacgccagttg
gggatccctcgtggagaggctcaacgttatatggatctctattttgagcgttatccgggg
gtgttggagtatatggagcgtactcgtaaacaggctgctgagcagggctatgtcacgaca
ctggatggtcgccgcctctatctgccggatattcactcacggaatgcaaaccgtcgaaaa
gcggctgaacgtgaggcgattaatgcccctatgcaaggtacggctgcggatattatcaag
cgggcgatgattgcggtggatggttggttacagcaagagccagaaccgttggtgcgtgtc
atcatgcaagtacacgatgaattggtctttgaagtgcatgaaagtgttttgcaaagtgct
gagcagaaaatccgtgagttgatggagcaaagtatgcaactggctgtgccattgaaggtg
gatgtcggtgttggcgctaactgggatcaagctcattag
DBGET
integrated database retrieval system
