Yersinia pestis Z176003: YPZ3_2873
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Entry
YPZ3_2873 CDS
T01210
Symbol
yfiF
Name
(GenBank) putative tRNA/rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
ypz
Yersinia pestis Z176003
Brite
KEGG Orthology (KO) [BR:
ypz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ypz03009
]
YPZ3_2873 (yfiF)
03016 Transfer RNA biogenesis [BR:
ypz03016
]
YPZ3_2873 (yfiF)
Ribosome biogenesis [BR:
ypz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
YPZ3_2873 (yfiF)
Transfer RNA biogenesis [BR:
ypz03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
YPZ3_2873 (yfiF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ADE65783
LinkDB
All DBs
Position
complement(3691683..3692849)
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AA seq
388 aa
AA seq
DB search
MNDSFSGKNGKVKVMYVRSDESSDDRNSSNRDNRNNSSRDNSNRDNNSRGRSQRPAGNGR
PGDNARQGDNTRQGNAPRNNDSRRPDSGRNERDRPSRPARSEGSSPYDSPWKTVSRAPSE
EPEFDHGGISGKSHIDPAQLRRQRAEETRVYGENACKALFESRPDAIVRAWFVQSVTPRF
REALKWMAANRKAYHVVEEDELAKASGTEHHGGVCFLIKKRQGLDAETYLQQQTQAKDCV
LALEEVGNPHNLGGIMRTCAHFGINGVLLQDPAMLESGAAVRTAEGGAEHIKAINADDFL
SVLDTFRKAGYTIVTTSSHKGVSLSKAELPAKMVLVLGQESDGLTDSAWQQGDLSVSIGG
TGRVESLNVSVATGILLAEWWRQNSAQG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcatttagtggcaaaaacggcaaagttaaagtgatgtacgtccgtagtgac
gaaagcagcgacgaccgtaacagcagtaaccgcgataaccgcaataacagtagtcgtgat
aacagtaatcgtgataataacagccgcggcagaagccagcgtccagcgggtaacggtcgc
ccgggtgataatgcacgtcagggcgataatacacgtcagggtaatgcaccacgcaataat
gactcacgtcgtcctgattctggccgtaatgaacgtgatcgtcctagccgtccggcacgt
tctgaaggcagtagcccttacgattcaccgtggaaaacggtatctcgtgccccttcggaa
gagccagagtttgatcatggtggtatcagcggtaaaagccatatcgatcctgcccagttg
cgccgtcagcgcgctgaagaaacacgcgtttatggtgagaatgcttgtaaggcgctgttt
gaaagccgccctgatgctatcgtccgggcttggtttgtgcaatctgtgaccccgcgtttt
cgtgaagcgctgaaatggatggcggctaaccgcaaagcttatcatgtggttgaagaggat
gagctggcgaaagcttcgggcactgaacaccatggcggggtatgtttcctgattaaaaaa
cgtcaggggctggatgcagaaacgtatctgcaacagcaaactcaggctaaagattgtgta
ctggcgctggaagaggtgggtaacccccataatctgggcggcattatgcgtacctgtgcg
catttcggtatcaacggcgtgttgctgcaagacccggcgatgctagaatctggcgcggca
gtccgcacggcggaaggcggagcagagcacatcaaggccatcaatgctgatgatttctta
tcggtattggataccttccgcaaggcgggttacaccatcgtgaccacctccagccataaa
ggtgtcagcttatcgaaagccgaactgccagctaaaatggtattggtattagggcaggag
agcgatggtttgacggacagtgcctggcagcagggggatctgagtgtctctatcggcggt
accgggcgggtcgaaagcctgaacgtttccgtggcaacgggtatcctgttggcggaatgg
tggcgtcagaatagcgctcaaggctag
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