KEGG   Yersinia pestis Z176003: YPZ3_3014
Entry
YPZ3_3014         CDS       T01210                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ypz  Yersinia pestis Z176003
Pathway
ypz00010  Glycolysis / Gluconeogenesis
ypz00020  Citrate cycle (TCA cycle)
ypz00260  Glycine, serine and threonine metabolism
ypz00280  Valine, leucine and isoleucine degradation
ypz00310  Lysine degradation
ypz00380  Tryptophan metabolism
ypz00620  Pyruvate metabolism
ypz00630  Glyoxylate and dicarboxylate metabolism
ypz00640  Propanoate metabolism
ypz00670  One carbon pool by folate
ypz00785  Lipoic acid metabolism
ypz01100  Metabolic pathways
ypz01110  Biosynthesis of secondary metabolites
ypz01120  Microbial metabolism in diverse environments
ypz01200  Carbon metabolism
ypz01210  2-Oxocarboxylic acid metabolism
ypz01240  Biosynthesis of cofactors
Module
ypz_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ypz_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ypz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ypz_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ypz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    YPZ3_3014 (lpdA)
   00020 Citrate cycle (TCA cycle)
    YPZ3_3014 (lpdA)
   00620 Pyruvate metabolism
    YPZ3_3014 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    YPZ3_3014 (lpdA)
   00640 Propanoate metabolism
    YPZ3_3014 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    YPZ3_3014 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    YPZ3_3014 (lpdA)
   00310 Lysine degradation
    YPZ3_3014 (lpdA)
   00380 Tryptophan metabolism
    YPZ3_3014 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    YPZ3_3014 (lpdA)
   00670 One carbon pool by folate
    YPZ3_3014 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ypz04147]
    YPZ3_3014 (lpdA)
Enzymes [BR:ypz01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     YPZ3_3014 (lpdA)
Exosome [BR:ypz04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   YPZ3_3014 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA Pyr_redox_3 FAD_binding_2 HI0933_like AlaDh_PNT_C NAD_binding_8 Thi4 FAD_binding_3 DAO
Other DBs
NCBI-ProteinID: ADE65923
LinkDB
Position
complement(3867636..3869063)
AA seq 475 aa
MMSTEIKTQVVVLGAGPAGYSAAFRCADLGLETILVERYSTLGGVCLNVGCIPSKALLHV
AKVIEEAKALAEHGIVFGEPKTDIDKVRVWKDKVINQLTGGLAGMAKGRKVKVVTGFGKF
TGANTLVVDGENGPTTINFDNAIIAAGSRPIQLPFIPHEDSRIWDSTDALALRTVPERLL
VMGGGIIGLEMGTVYHALGSKIDVVEMLDQVIPAADKDVVKVFTKRISKQFNLMLETKVT
AVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGQAGVEVDDRGFIHVDK
QLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTEPEVAW
VGLTEKEAKEKGISYETSTFPWAASGRAIASDCADGMTKLIFDKETHRIIGGAIVGTNGG
ELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgatgagtactgaaattaaaactcaggtcgtggtacttggggcaggtccagcagggtac
tctgctgcttttcgttgtgcggatttagggttagaaaccattctggttgaacgttactcc
actctggggggggtttgcctgaatgtgggttgtatcccttccaaggcactgttacacgtt
gccaaagtgatcgaagaagccaaagcgctggctgaacatggtatcgtttttggcgagcct
aaaactgatattgataaagtccgtgtctggaaagataaagttatcaatcagttgaccggt
ggtttggcaggtatggctaaaggccgtaaagtcaaagtagtgactggttttggtaaattt
accggtgcgaacaccttagtggttgatggtgagaatggtccaacaaccattaacttcgat
aacgctattatcgcggcgggttctcgcccaattcaactgccattcattcctcatgaagac
tcacgtatttgggattcaactgacgcactggcattgagaacggttcctgagcgcttgttg
gtgatgggcggtggtatcattggtctggaaatggggaccgtttaccacgcactgggttct
aagattgacgtggtcgaaatgcttgatcaggtgatccccgcagcagataaagacgtggtg
aaagtctttaccaagcggatcagcaagcagttcaatctgatgctggaaaccaaagtgaca
gcggtagaagccaaagaagacggtatctatgtcacgatggaaggcaaaaaagcgccagca
gagccacaacgctatgatgcggtgttggttgcgattggccgcgtgcctaacggtaagttg
ctggatgcgggtcaggcgggtgttgaagttgatgatcgtggctttatccacgttgataag
caactgcgcaccaatgtgccacacatttttgctatcggtgacatcgtgggtcagccaatg
ctggcgcataaaggtgtccacgaaggccatgttgccgctgaagttatcgcaggcatgaag
cactatttcgatccgaaagttattccatcgattgcgtacactgaaccagaagtcgcatgg
gttggtttgaccgaaaaagaagcaaaagagaaaggcatcagctacgaaacctccaccttc
ccgtgggcggcatcgggccgtgctatcgcttctgattgcgcagatggtatgactaaactg
attttcgacaaagaaactcaccgtatcattggtggtgcgattgtcggtactaacggtggc
gaactgttaggtgaaatcggtctggccattgagatgggttgtgatgcagaagatatcgca
ttgaccattcatgctcacccaacattgcatgaatcagtgggcctggcggcggaaatctac
gaaggtagcattactgacctgcctaacccgaaagcgaaaaagaaataa

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