Yersinia pestis Z176003: YPZ3_3014
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Entry
YPZ3_3014 CDS
T01210
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ypz
Yersinia pestis Z176003
Pathway
ypz00010
Glycolysis / Gluconeogenesis
ypz00020
Citrate cycle (TCA cycle)
ypz00260
Glycine, serine and threonine metabolism
ypz00280
Valine, leucine and isoleucine degradation
ypz00310
Lysine degradation
ypz00380
Tryptophan metabolism
ypz00620
Pyruvate metabolism
ypz00630
Glyoxylate and dicarboxylate metabolism
ypz00640
Propanoate metabolism
ypz00670
One carbon pool by folate
ypz00785
Lipoic acid metabolism
ypz01100
Metabolic pathways
ypz01110
Biosynthesis of secondary metabolites
ypz01120
Microbial metabolism in diverse environments
ypz01200
Carbon metabolism
ypz01210
2-Oxocarboxylic acid metabolism
ypz01240
Biosynthesis of cofactors
Module
ypz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ypz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ypz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ypz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ypz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
YPZ3_3014 (lpdA)
00020 Citrate cycle (TCA cycle)
YPZ3_3014 (lpdA)
00620 Pyruvate metabolism
YPZ3_3014 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
YPZ3_3014 (lpdA)
00640 Propanoate metabolism
YPZ3_3014 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YPZ3_3014 (lpdA)
00280 Valine, leucine and isoleucine degradation
YPZ3_3014 (lpdA)
00310 Lysine degradation
YPZ3_3014 (lpdA)
00380 Tryptophan metabolism
YPZ3_3014 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
YPZ3_3014 (lpdA)
00670 One carbon pool by folate
YPZ3_3014 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ypz04147
]
YPZ3_3014 (lpdA)
Enzymes [BR:
ypz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
YPZ3_3014 (lpdA)
Exosome [BR:
ypz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
YPZ3_3014 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
GIDA
Pyr_redox_3
FAD_binding_2
HI0933_like
AlaDh_PNT_C
NAD_binding_8
Thi4
FAD_binding_3
DAO
Motif
Other DBs
NCBI-ProteinID:
ADE65923
LinkDB
All DBs
Position
complement(3867636..3869063)
Genome browser
AA seq
475 aa
AA seq
DB search
MMSTEIKTQVVVLGAGPAGYSAAFRCADLGLETILVERYSTLGGVCLNVGCIPSKALLHV
AKVIEEAKALAEHGIVFGEPKTDIDKVRVWKDKVINQLTGGLAGMAKGRKVKVVTGFGKF
TGANTLVVDGENGPTTINFDNAIIAAGSRPIQLPFIPHEDSRIWDSTDALALRTVPERLL
VMGGGIIGLEMGTVYHALGSKIDVVEMLDQVIPAADKDVVKVFTKRISKQFNLMLETKVT
AVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGQAGVEVDDRGFIHVDK
QLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTEPEVAW
VGLTEKEAKEKGISYETSTFPWAASGRAIASDCADGMTKLIFDKETHRIIGGAIVGTNGG
ELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtactgaaattaaaactcaggtcgtggtacttggggcaggtccagcagggtac
tctgctgcttttcgttgtgcggatttagggttagaaaccattctggttgaacgttactcc
actctggggggggtttgcctgaatgtgggttgtatcccttccaaggcactgttacacgtt
gccaaagtgatcgaagaagccaaagcgctggctgaacatggtatcgtttttggcgagcct
aaaactgatattgataaagtccgtgtctggaaagataaagttatcaatcagttgaccggt
ggtttggcaggtatggctaaaggccgtaaagtcaaagtagtgactggttttggtaaattt
accggtgcgaacaccttagtggttgatggtgagaatggtccaacaaccattaacttcgat
aacgctattatcgcggcgggttctcgcccaattcaactgccattcattcctcatgaagac
tcacgtatttgggattcaactgacgcactggcattgagaacggttcctgagcgcttgttg
gtgatgggcggtggtatcattggtctggaaatggggaccgtttaccacgcactgggttct
aagattgacgtggtcgaaatgcttgatcaggtgatccccgcagcagataaagacgtggtg
aaagtctttaccaagcggatcagcaagcagttcaatctgatgctggaaaccaaagtgaca
gcggtagaagccaaagaagacggtatctatgtcacgatggaaggcaaaaaagcgccagca
gagccacaacgctatgatgcggtgttggttgcgattggccgcgtgcctaacggtaagttg
ctggatgcgggtcaggcgggtgttgaagttgatgatcgtggctttatccacgttgataag
caactgcgcaccaatgtgccacacatttttgctatcggtgacatcgtgggtcagccaatg
ctggcgcataaaggtgtccacgaaggccatgttgccgctgaagttatcgcaggcatgaag
cactatttcgatccgaaagttattccatcgattgcgtacactgaaccagaagtcgcatgg
gttggtttgaccgaaaaagaagcaaaagagaaaggcatcagctacgaaacctccaccttc
ccgtgggcggcatcgggccgtgctatcgcttctgattgcgcagatggtatgactaaactg
attttcgacaaagaaactcaccgtatcattggtggtgcgattgtcggtactaacggtggc
gaactgttaggtgaaatcggtctggccattgagatgggttgtgatgcagaagatatcgca
ttgaccattcatgctcacccaacattgcatgaatcagtgggcctggcggcggaaatctac
gaaggtagcattactgacctgcctaacccgaaagcgaaaaagaaataa
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