Yersinia pestis Z176003: YPZ3_3187
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Entry
YPZ3_3187 CDS
T01210
Symbol
rpoN
Name
(GenBank) DNA-directed RNA polymerase subunit N
KO
K03092
RNA polymerase sigma-54 factor
Organism
ypz
Yersinia pestis Z176003
Pathway
ypz02020
Two-component system
ypz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ypz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YPZ3_3187 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
YPZ3_3187 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ypz03021
]
YPZ3_3187 (rpoN)
Transcription machinery [BR:
ypz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YPZ3_3187 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ADE66096
LinkDB
All DBs
Position
complement(4091572..4093005)
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AA seq
477 aa
AA seq
DB search
MKQGLQLKFSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHEEIDAKE
TVDSESLDTREALEQKDMPEELPLDATWDEIYTAGTPSGMGNDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFTETDAAIATSIVDAVDDTGYLTVPLEDILESMGDENVALDEVEAVLK
RIQHFDPIGVAARNLRECLLVQLSQYAKDTPYLAEARLIVSEYLDLLGNHDFRMMIRLSR
LKEDTLKEAIALIQSLDPRPGQSINTGESEYVIPDVLVRKEKGIWTVELNADSIPRLKVN
QQYAAMGNSVRNDSDGQFIRSNLQEAKWLIKSLESRNETLLKVARCIVEQQVEFFEKGAE
FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLVAAENPAKPLSDSKLTTLLCEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtctgcaactcaagttcagccaacaactggcgatgactccgcagcttcag
caagctattcgcttgttgcaactttcgacgcttgaactccagcaggagattcagctcgcg
ctggagagcaacccccttcttgagcaaacggaccttcatgaagagatagatgctaaggaa
accgtggacagtgaatcgctggatacccgcgaagcactagaacaaaaggatatgccggaa
gaattaccgctagatgccacctgggatgagatttacaccgcaggtaccccatccggcatg
ggcaatgattacagtgacgatgaactgcccgtctatcagggtgaaaccacccaaacactg
caagactatctgatgtggcaggtggatttaacaccgttcactgagaccgacgccgccatt
gcgacttctatcgttgacgctgttgatgacactggctatctcactgtgccgctggaagat
attctggaaagcatgggtgatgagaacgtagcgctagacgaagtggaagcggtactcaaa
cgtattcagcattttgatcccatcggtgtcgctgcccgtaacttgcgcgaatgcttgctg
gtacagttatcacaatatgccaaagacaccccttatttggccgaagcgcgtctgatcgtc
agcgaatatttagatttgctaggcaaccatgatttccgcatgatgatccgcttgagtcgg
ctgaaagaagatacacttaaagaagccatcgcgctgatccaatcactggatccacggcca
ggtcagtcgatcaataccggggagtctgagtatgtcatcccggatgttctggttcgtaaa
gagaaaggtatctggacggtggagctgaatgccgatagcatcccacgtctaaaagttaac
caacaatacgcagcgatgggcaatagcgtccgtaatgacagtgacgggcagtttatccgt
agcaatttgcaagaagcaaaatggttgatcaaaagccttgaaagccgcaatgaaacgctg
ctaaaagtagcaagatgtattgtagaacagcaagtcgagttctttgagaaaggtgcagag
tttatgaaacccatggtactggctgatatcgcccaggctgtggatatgcatgaatcaaca
atctctcgagtgaccacgcagaaattcttgcacagtccccgagggatttttgaactgaag
tatttcttctctagccacgtcaataccgatagtgggggcgaagcctcttctacggcgatc
cgggcgctggtgaagaaattagtggcggcagaaaaccctgccaagccattaagcgatagt
aaactaaccactttattatgtgaacaaggcattatggtagcacggcgcaccgtcgcaaaa
taccgagagtcgttatccatccctccgtctaatcaacgtaaacagttggtttga
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