Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_01035
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Entry
UGYR_01035 CDS
T03887
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yrb03000
]
UGYR_01035
Transcription factors [BR:
yrb03000
]
Prokaryotic type
Helix-turn-helix
Other families
UGYR_01035
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
MarR
HTH_24
HTH_29
HTH_Crp_2
Penicillinase_R
RWP-RK
DUF3640
Motif
Other DBs
NCBI-ProteinID:
AKA39865
LinkDB
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Position
complement(240918..241787)
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AA seq
289 aa
AA seq
DB search
MNTLEKIQNNLDLLSKSERKVAEVILASPQTAIHSSIATLAKMANVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVNRNVEEDDSVAAYTSKIFESTMASLDMVKTHLDIAAINR
AVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVIYFDDVVMQRMSCMNSGEGDVVV
LISHTGRTKNLVEMARLARDNDATVIAITSRDTPLAAEATLPLILDVPEDTDVYMPMVSR
IAQLTLIDVLATGFTLRRGDKFRDNLKRVKEALKESRFDKGTSLTSLIE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgctggaaaagatccaaaataatctggacctcctgagcaaatctgaaaggaaa
gtcgccgaggtaatacttgcctccccacaaactgccattcattctagtattgctacactg
gcaaaaatggccaatgtcagcgaaccaacggtcaatcgtttttgccgtcgtctggatacc
aaaggtttccccgattttaaactgcatttagctcaaagtctggcaaatggcacaccttat
gtgaatcgtaacgtcgaagaagatgatagcgttgccgcttataccagcaaaattttcgag
tcgacaatggccagtctggatatggtgaaaacccatctggatatcgcagcgatcaatcga
gcggtagatttactcactcaagccaagaaaatttccttctttggtctgggtgcctctgcc
gccgtcgcccatgatgccatgaacaaatttttccgcttcaatatcccggtcatctacttt
gatgacgttgtcatgcagcgtatgagttgtatgaattccggcgaaggtgacgtcgtggta
ctgatttcccacactggcagaaccaagaatctggtcgaaatggctcgattggctcgggat
aatgacgctacagtgattgcgataacctcgcgcgatacaccactggcggcagaagcgacc
ttgccattgatcctggatgtgccggaagataccgatgtctatatgccaatggtgtcacga
atcgctcagttgacgttgattgacgtgctggccaccggatttacattacgacgcggcgat
aaattcagggataacttgaagcgggtcaaagaagcgttgaaagaatcgcgctttgataaa
ggaacgtccttaaccagtcttattgaatga
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