Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_01080
Help
Entry
UGYR_01080 CDS
T03887
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00061
Fatty acid biosynthesis
yrb00071
Fatty acid degradation
yrb01100
Metabolic pathways
yrb01212
Fatty acid metabolism
yrb02024
Quorum sensing
yrb04146
Peroxisome
Module
yrb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
UGYR_01080
00071 Fatty acid degradation
UGYR_01080
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
UGYR_01080
09145 Cellular community - prokaryotes
02024 Quorum sensing
UGYR_01080
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
yrb01004
]
UGYR_01080
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yrb04147
]
UGYR_01080
Enzymes [BR:
yrb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
UGYR_01080
Lipid biosynthesis proteins [BR:
yrb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
UGYR_01080
Exosome [BR:
yrb04147
]
Exosomal proteins
Exosomal proteins of breast milk
UGYR_01080
Exosomal proteins of breast cancer cells
UGYR_01080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AKA37117
LinkDB
All DBs
Position
250292..251980
Genome browser
AA seq
562 aa
AA seq
DB search
MEKAWLKRYPADVPAEIDPDRYSSLVEMFENAAQRYADQPAFINMGEVMTFRKLEERSRA
FAAYLQNGLGLKQGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELEHQLNDS
GASAIVIVSNFAHTLEKVVFNTQVKHVILTRMGDQLSAAKGTLVNFVVKYIKRLVPKYYL
PDAISFRTALQKGRRLQYVKPDIANSDLAFLQYTGGTTGVAKGAMLTHRNMQANLEQAKA
AYSPLLLPGQELVVTALPLYHIFALTMNCLFFIELGGRSLLITNPRDIPGTVKELARYPF
TAMTGVNTLFNALLNNEDFNKLDFSTLRLSVGGGMPVQQAVAEKWEKLTGKHLLEGYGLT
ECSPLVTGNPYDLKHYSGSIGLPVPSTDVRLIDDNGQDVAVGMPGELWVRGPQVMLGYWQ
RPEATDEVLKDGWLATGDIATIDEMGFLRIVDRKKDMILVSGFNVYPNEIEDVIALHSKV
LESAVIGVPNDLSGETVKVFVVRKDPSLTRDELLTHCRRYLTGYKVPKIVEFRDELPKSN
VGKILRRELRDETVKESSKNAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaagcatggctaaaacgctacccggcagatgttccagcggaaatagatccggat
cgttattcttctttggtggaaatgtttgagaatgcggcgcagcgctatgcggaccagcct
gcatttatcaacatgggtgaggtaatgactttccgtaaactggaagagcgtagtcgtgct
ttcgccgcctatctacaaaatggcttagggctgaagcagggcgaccgagtcgcgttgatg
atgcctaatctattgcaatatcctattgccctatttggtattttacgggcaggaatggtg
gtcgtgaacgtcaatcccctgtacacgccccgagagctagaacatcagttgaatgacagc
ggcgcgtcagccattgtgattgtctcaaactttgctcatacgttggaaaaagttgttttt
aatacacaggttaaacacgttattttaacccggatgggcgaccaactctcagctgcgaag
ggaacattggtcaactttgtggttaaatatatcaaacggctggtgccaaaatattatttg
ccggatgcgatttcgttccgtactgcgttgcagaaaggtcgccgcttacagtatgtgaag
ccggatatcgccaacagtgacttggctttcttgcaatacaccggtggcacgacgggggtc
gcaaaaggggcgatgctgactcacaggaatatgcaggccaaccttgagcaggcaaaggca
gcctattcgccattgctgctaccaggccaggagttggttgtcaccgcgctgccgctgtac
catattttcgccttgaccatgaactgtttgtttttcatcgaattgggtggacgtagcctg
cttatcactaatccccgcgatattccgggtaccgtcaaagaactggctcgctatccgttt
accgcaatgacgggcgtgaataccttgttcaatgcattgctaaataatgaagatttcaac
aaactggatttctcaacactgcgactttccgttggtggcggcatgccggttcagcaagcg
gttgccgaaaaatgggaaaaactgacgggcaaacatttgctggaaggctacggtctgact
gaatgctcaccgctggtaacagggaatccctatgatttaaaacattatagtggcagtatt
ggtcttcctgtgccgtcaacggatgttcgcctgatcgacgataacggtcaggatgttgct
gtgggtatgcccggcgaactatgggtgcgtggaccgcaagttatgttaggctattggcaa
cgccctgaagcgactgacgaagttctcaaagatggctggttggccacgggcgatatcgct
accattgatgaaatgggtttcctgcgtattgtcgatcgcaaaaaagatatgattctggtt
tctggcttcaacgtttatcctaatgaaatcgaagatgtgatagcgttgcactctaaggta
ttggaatcagcagttattggcgtgccgaatgatttatccggtgagacggttaaagtcttc
gtggtgagaaaagatccttccctgactcgagatgagttactcacccactgccgccgttat
ttgaccggttataaagtaccgaaaattgtcgagttccgtgacgagttgccgaaatcaaac
gtaggcaaaatattacgcagagaactgcgtgatgaaaccgttaaggagagtagcaaaaac
gctgcttaa
DBGET
integrated database retrieval system
