Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_02520
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Entry
UGYR_02520 CDS
T03887
Symbol
ihfA
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yrb03032
]
UGYR_02520 (ihfA)
03036 Chromosome and associated proteins [BR:
yrb03036
]
UGYR_02520 (ihfA)
03400 DNA repair and recombination proteins [BR:
yrb03400
]
UGYR_02520 (ihfA)
DNA replication proteins [BR:
yrb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
UGYR_02520 (ihfA)
Chromosome and associated proteins [BR:
yrb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
UGYR_02520 (ihfA)
DNA repair and recombination proteins [BR:
yrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
UGYR_02520 (ihfA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AKA37378
UniProt:
A0A085U803
LinkDB
All DBs
Position
complement(566832..567128)
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AA seq
98 aa
AA seq
DB search
MALTKAEMSEHLFEKLGLSKRDAKDLVELFFEEVRRALENGEQVKLSGFGNFDLRDKNQR
PGRNPKTGEDIPITARRVVTFRPGQKLKSRVENATPKE
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttactaaagctgaaatgtcagaacatctgtttgaaaagcttgggcttagcaaa
cgggatgccaaggacctggtagagttattctttgaagaggtacgtcgtgctttggagaat
ggcgaacaggtcaaactgtctggctttggcaattttgatctgagagacaagaaccaacgt
ccgggccgtaatccgaagaccggtgaggacattcctattacggcgcgccgtgtggtgact
ttccgtcctgggcagaagctaaaaagccgggtagagaatgccactcctaaagagtga
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