Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_02975
Help
Entry
UGYR_02975 CDS
T03887
Name
(GenBank) exodeoxyribonuclease X
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UGYR_02975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yrb03400
]
UGYR_02975
DNA repair and recombination proteins [BR:
yrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
UGYR_02975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AKA37458
LinkDB
All DBs
Position
651792..652454
Genome browser
AA seq
220 aa
AA seq
DB search
MNFRVIDTETCGLDGGIVEIASLDFIDGEITNPMSDLVSPDRPISIEAMAIHHITEEMVE
GKPRIAVAVGKYQGSPYYVAHNAPFDRGVLPEMGGEWICTYKLARALYPDIKYSNQYLRY
ALRLDVTPPADLYPHRALYDCYITAALFQRIMRDSGWSAEKMVELTQAPLLLRTLEFGKY
RGKNIEQIARQDPDYLRWMLKSVKDLTPDMRHTLMHYLES
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcgtgtgattgatactgagacctgcgggttggatggcggtatcgtcgaaatt
gcatcactggattttattgatggagaaatcactaatccgatgagcgacctggttagccca
gatcgaccaattagcattgaagccatggctattcaccatattaccgaagaaatggtcgag
ggaaagccacgcattgccgtagccgttggcaaatatcagggcagtccgtattacgttgca
cacaacgctccgtttgatcgcggtgtgttgccagaaatgggtggtgagtggatttgcact
tacaaactggcgcgggcgctgtatccagatattaaatacagtaaccagtatttgcgctat
gcattgcgtctggatgttacgccgccggcagatttgtaccctcaccgcgcactttatgat
tgctatatcaccgcggcattattccagcggattatgcgtgattctggctggagcgcggag
aaaatggtcgaactgactcaagccccattgttgttaagaacgttagaatttggcaaatat
cgcgggaaaaatattgaacagatagcccgacaggatccggactatctgcgctggatgttg
aaatcggtgaaagatctgacgccagatatgcgccataccttgatgcattatctggaatcc
tga
DBGET
integrated database retrieval system
