Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_03225
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Entry
UGYR_03225 CDS
T03887
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00470
D-Amino acid metabolism
yrb00550
Peptidoglycan biosynthesis
yrb01100
Metabolic pathways
yrb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
UGYR_03225
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
UGYR_03225
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
UGYR_03225
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yrb01011
]
UGYR_03225
Enzymes [BR:
yrb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
UGYR_03225
Peptidoglycan biosynthesis and degradation proteins [BR:
yrb01011
]
Precursor biosynthesis
Amino acid ligase
UGYR_03225
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
AKA37504
UniProt:
A0A085U630
LinkDB
All DBs
Position
complement(703744..704850)
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AA seq
368 aa
AA seq
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MTKIRVGVIFGGKSAEHEVSLQSAKNIVDAIDTEKFEVTLLGIDKQGQWHVNDASSYLLH
AENPALIALNHSNKNVALVPGQQQRQLIDANNASALSQLDVVFPIVHGTLGEDGSLQGLL
RMANMPFVGSGVVGSAASMDKDVTKRLLRDAGLNIAPFITLTRANREQYGFEPVREKLGL
PLFIKPANQGSSVGVSKVCSAEEFTAAVELAFSFDHKVLVESAIVGREIECAVLGNDQPK
ASLCGEVVISDEFYSYDTKYISDSGAQVVIPAVLDAQVSDRIRAVAVEAFRTLECLGMAR
VDVFLTPDNKIIINEINTLPGFTNISMYPKLWRATGIDSTELITTLIELALERHQQDQAL
KSSISLNG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaaatacgggtgggtgtgatttttggtggtaaatcggctgaacacgaagtgtca
ttacaatcggcaaagaatattgttgatgcgatcgatacggaaaagtttgaagtcaccttg
ttagggattgataaacaaggccagtggcacgtcaatgatgcgtccagctatcttttacac
gcggaaaaccccgcgctgattgcgcttaaccattccaataaaaatgttgctttagtgccg
ggtcaacaacagcgacaactgattgatgcgaacaatgcatcggcattgtcgcagttggac
gttgttttcccgattgtgcatggcacattaggtgaagacggatcgctgcaagggctattg
cggatggcgaacatgccttttgtcggttcgggagtggttggttcggcggctagtatggat
aaagatgttaccaaacgcttgctccgggatgccgggttgaatatcgcgccttttatcacg
ttgacccgcgccaatcgtgagcaatatggttttgagccagtgcgagaaaaactgggttta
ccgctgtttatcaaaccggccaaccaaggttcttccgttggtgtaagtaaggtgtgcagt
gcggaggagtttaccgctgctgttgaactggcattcagctttgaccataaagttctggtt
gagtcagccattgtaggtcgtgaaatagagtgtgcggttttgggtaacgatcagccgaaa
gccagcctatgcggtgaagtcgtgattagcgatgaattttactcttacgatactaaatat
attagtgatagtggcgcgcaggttgttattccggcggtgcttgatgcgcaggttagcgat
aggattcgggcggttgcggtggaggctttccgtacgctggaatgcctgggtatggcgcgg
gttgatgttttcctaaccccagataataaaattattatcaatgaaataaatacactacct
ggttttaccaatatcagtatgtatccgaaactgtggcgcgcgaccggcattgattctact
gagttgatcacgaccttgatcgaactggcgctggagcggcatcagcaggatcaggcatta
aaaagctcgatctctttgaacggctaa
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