Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_05865
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Entry
UGYR_05865 CDS
T03887
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00550
Peptidoglycan biosynthesis
yrb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
UGYR_05865
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
yrb01003
]
UGYR_05865
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yrb01011
]
UGYR_05865
Enzymes [BR:
yrb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
UGYR_05865
Glycosyltransferases [BR:
yrb01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
UGYR_05865
Peptidoglycan biosynthesis and degradation proteins [BR:
yrb01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
UGYR_05865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AKA37964
LinkDB
All DBs
Position
complement(1254365..1256701)
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AA seq
778 aa
AA seq
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MNNPFLRRRRVWLALGFITLLLPAAVWLADRIWPLPLTEVQMARIVVAEDGSPLWRFADD
EGVWRYPVSIKHVSPYYLQALLTYEDRWFYQHPGVNPFSLARAAWQDLRAGKILSGGSTL
SMQVARLIEPHSRTLTGKLRQIWRTFQLEWHLSKDQILEIYLNRAPFGGTLQGIGAASWT
YLGKSPTNLTQAEAALLAVLPQSPSHLRPDRYPQRAKAARDKVLTRLAQYKVWPVDQVTE
IQQEDIWLAPRKVPQLAPLLARRLITGNKRDVIRTTLDAGLQRQLEDMAQGWRHQLPEKT
SLGILVVDHTTMEVKAYLGSVDFGDDSRFGHVDMISAWRSPGSTLKPFLYALALDDGLIH
GESLLQDVPRRFGDYRPGNFDTGFHGPVSASEALVRSLNLPAVQLLEAYGAKRLTANLRN
VGLRLRFPAHSEPNLALILGGTGSRLDQLVAAFSAFARGGMAGQLRFLPEQPLSQRRLFS
PGSAWIVRRIMAGEGRPVPDDVLPAVVPLAWKTGTSYGYRDAWALGLNARYTLGIWVGRP
DGTPVAGQFGYATAVPILHQVNNLLMSRLNQGHHALPTDPRPTSVSREEICWPGGQPLPS
GDTDCRQRRQSWVLDGTLPPTLAAAGQENIQGNQLSLWLNKQGQRVAADCPDATPVKLSL
WPLPLEPWLPLAERRAQRLPPVSQDCPPLTETDSPPLLILGIRNGATVQRLPGKNSLDLR
LEAQGGQGARWWFLNGEQIATTQNNQSWLQTLTVPGRYQLNVLDESGQVSKIEFQLLK
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaataatccttttctgcgccgtcgccgtgtatggcttgctctggggtttattacgctg
ctattgccggcggctgtttggctggccgatcgcatctggccgttgccactgacggaggtg
caaatggcgcgaattgtcgtggcagaagacggttcgcctctgtggcgctttgccgatgat
gagggtgtatggcgttatcccgtcagtattaaacacgtttctccctactatttacaagcg
ttgctaacctacgaagatcgctggttttatcagcatcctggcgtaaatccattctctttg
gcacgagcagcctggcaagatttacgggcggggaaaattctctcaggcggcagtacacta
tcaatgcaggttgcccgcttgatcgaaccacattcgcgcactttgaccggaaaattgcgc
caaatatggcgtacttttcaactggaatggcatttatccaaagaccagattttagaaatc
tatttaaaccgcgcaccttttggcggaacattgcaaggaattggagccgccagttggact
tatctgggcaaatcacccaccaatctgactcaggccgaagccgcgctattggcggtgcta
ccgcagtcacccagccatttacggccggatcgctatcctcaacgtgctaaagctgcccgt
gacaaagtattaacccgcctggctcaatataaggtctggccggtagatcaggttactgaa
attcaacaggaagatatttggctcgcgccacgaaaagtgccgcaattggcaccgttattg
gcccgccgcctgatcactggcaataaacgcgacgtaatccgaacgacactggatgccggt
ttacagcgccaactggaagatatggcgcaaggatggcggcatcagctaccggagaagacc
tcacttgggattttggtggtggaccacaccacgatggaagtgaaggcttacctcggttcg
gtggattttggtgatgacagccgttttggccatgtcgatatgattagtgcttggcgatcg
cccggctcgacactcaaaccctttttgtatgctttggcgcttgatgatggcttgattcat
ggcgagtcattattacaggatgtgccacggcgttttggtgattatcggcccggcaatttt
gacactggatttcatggccctgtcagcgccagcgaggctttggttcgctccctaaatttg
cctgcggtgcaattactggaagcgtatggtgccaaacgattgactgccaatttacgtaat
gtgggtctcaggctgcgttttcctgcgcacagtgaacctaatctggcgttgattttagga
ggaaccggttcgcgtctggatcagttagtggcggcattcagtgcctttgcgcgcggcgga
atggccgggcaattgcgttttttgccagaacagcctttatctcagcgacgcttgttttcc
cccggatcggcgtggatcgtccgccgaatcatggctggggaagggcgaccggttcctgat
gatgtcctccctgccgtcgttccattggcgtggaaaaccggaaccagctacggttaccgc
gatgcttgggcacttggcctgaatgcccgctatacgttgggcatctgggttggacgccct
gacggcacaccggttgcgggtcagtttggctatgctacggcggtaccgattcttcatcag
gtcaataacctgttgatgtcgcgtttgaatcaagggcatcacgctttaccgacggatcct
cggcctacatcggtcagtcgggaggaaatttgttggccgggtgggcagccactgccaagt
ggtgatacggattgtcgtcagcgtcgtcaaagctgggtgttggatggcactctgccgcct
acattagcggctgcagggcaggagaatattcaaggcaaccagctaagtttatggttgaac
aaacagggtcagcgagtcgcggcggattgtccggatgcaacgccagttaaactctcttta
tggccgctgccgcttgaaccttggttaccgttggccgagcgtcgggcgcagcgcttgccg
ccggtcagtcaggattgtccgcctctgacggaaactgatagccctcctttattgattctg
ggtattcgaaatggtgcgacggtacagcgactaccagggaaaaatagcctggatttacgg
ttggaggctcagggagggcaaggtgcgcgttggtggtttcttaacggtgagcagattgcc
accacccagaacaatcaatcatggctgcaaaccctgacagtccctggccgctatcaactg
aatgttttggatgaaagtgggcaggtgagtaagatcgaatttcaactattaaaataa
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