Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_06090
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Entry
UGYR_06090 CDS
T03887
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
UGYR_06090 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yrb03019
]
UGYR_06090 (rnc)
03009 Ribosome biogenesis [BR:
yrb03009
]
UGYR_06090 (rnc)
03036 Chromosome and associated proteins [BR:
yrb03036
]
UGYR_06090 (rnc)
Enzymes [BR:
yrb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
UGYR_06090 (rnc)
Messenger RNA biogenesis [BR:
yrb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UGYR_06090 (rnc)
Ribosome biogenesis [BR:
yrb03009
]
Eukaryotic type
90S particles
RNase
UGYR_06090 (rnc)
Prokaryotic type
rRNA processing factors
UGYR_06090 (rnc)
Chromosome and associated proteins [BR:
yrb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
UGYR_06090 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AKA38007
UniProt:
A0A085UA91
LinkDB
All DBs
Position
complement(1306531..1307211)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVITRLQRKLGYTFQQQELLLQALTHRSASSKHNERLEFLGDSILSFVIANELYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSGIQTVERLILDWYRSRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLGEPVVGTGSSRRKAEQAAAEQALKQLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaataaccaggctacagcggaagctgggctatacttttcaacagcag
gaactcttgctgcaagcactgactcatcgtagcgccagcagtaaacacaatgagcgttta
gagttcctgggtgactcaattctgagttttgttatcgccaatgagctgtaccaccgtttc
cctcgcgttgacgagggcgatatgagtcggatgcgagccacattggtaagaggcaataca
cttgccgaaatggcccgtgaatttgaccttggcgagtgtttacgcctcggcccgggtgag
ctgaagagcggcggtttccgccgtgaatctattttggcagatacggtagaagcccttatc
ggtggcgtattcctcgatagtggtattcaaacggtagaacggctgattcttgattggtat
cgtagccggttggacgaaatcagccccggtgataagcagaaagacccaaaaacacgtttg
caagaatacttgcagggtcgtcatctgccgttaccttcttacctggttgtgcaggttcgc
ggagaagcacacgatcaggaatttactatccactgccaggtcagtggcttgggcgaaccg
gtcgtcggtaccggatcaagtcgccgtaaagctgagcaggcagcagcggaacaagcgctg
aaacagttggagcttgaatga
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