Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_06845
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Entry
UGYR_06845 CDS
T03887
Symbol
recC
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UGYR_06845 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yrb03400
]
UGYR_06845 (recC)
Enzymes [BR:
yrb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
UGYR_06845 (recC)
DNA repair and recombination proteins [BR:
yrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UGYR_06845 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AKA38136
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All DBs
Position
complement(1483096..1486467)
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AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDLLKAITTALIERDPLDNPFEPEVILVQSPGMAQWLQMQLAQQFSIAANI
EFPLPATFIWDMFTKVLPGIPKESAFSKDAMTWKLMWLLPDLLNEPVFSSLQRYLSDDGD
KRKIYQLAARVADLFDQYLVYRPKWLETWEQGHEIEGLDEAQHWQAPLWKALTEYTRQLQ
QPEWHRANLYQRFIYALHESDICPPGLPKRVFICGVSALPPIYLSALQALGKHIDIHLMF
TNPCRYFWGDIQNYAFLAKLQSRKRRHYREKTELSLFREPEQAARLFNDDGEQNLSNPLL
ASWGRLGRDHMYLLSQVDEIQEVQAFVDIEPDNLLHAIQHDMLELEDHAIIGTTQETLSS
SNKKRRLDPKDRSISLHVCHSSQREVEVLQDQLLAMLEADPELTPRDIIVMVADIDSYTP
YIHAVFANAPFERHLPFAISDRKASQAHPALQAFITLLDLPQSRFTSEQVLALLEVPALA
NRFGIDEHGLRRLRQWVGESGIRWGLDDDNVRELSLPATGQHTWRFGLTRMLLGYAMSSD
AGNWHDVLPYDESSGLAAELVGQLADMLMQLSHWRAQLAEARTLVAWSPLCRQMLDAFFE
QDNETEAVLALIEQQWLKVISYGISAQYPDVVPLTLLRDELAARLDNERISQRFLAGPIN
FCTLMPMRSIPFKVVCLLGMNDGIYPRTLPPLGFDLMARQIQRGDRSRRDDDRYLFLEAL
LSAQQRLYISYIGRSIQDNSTRYPSVLVSELIEYIGQSFHLPGDEAASVDESEQRVTAHL
LNWHPRVPFAAENFERDSAIQSYAAEWLPAAAAKGQAHPDFNQPLLPEPISEILLDDLIR
FYRHPVRAFFQRRLGVNFVIEETELPDEEPFTVDNLSRYQLNTQLLNALIDDGDANKVFA
RARASGELPFGAFGEIYWQGQVEEMALLAEQIRNEQGDADSLELNIVLENITITGWMHQV
QTDGLMRWRPAALTVVDALLLWVEHVVYCAAGGSGESRIYGRKGTVWRFGPLDESKARAY
LQTLVEGYQGGMSQPLMLLSKTGWAWLSQCFDSESGEILWDDETQDKARGKLLLAWQGSQ
QISGEGEDPYIQRVFRCMDNDRLAVILQETERYLLPVMRHNRA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtttatcattctaatcaattggatttacttaaagcaattaccactgcgttg
atagaacgagatccgctggataatccatttgagcctgaggttattctggttcaaagccca
ggaatggcgcagtggctacagatgcaactggctcaacaattcagcattgctgctaatatc
gagtttccgctacctgcaacctttatctgggatatgtttaccaaagtactacccggaatt
cccaaggaaagcgccttcagcaaagatgccatgacatggaagctgatgtggttattaccc
gatctgcttaatgaacccgtattttcgtcattacagcgttatctgagcgatgatggtgat
aaacgcaagatttatcaattggctgcacgagttgccgacctctttgaccagtacttggta
tatcggcctaagtggctggaaacctgggagcaggggcatgaaatcgaggggttggatgag
gctcagcattggcaggctcctctttggaaagccttaaccgaatatacccgccaactgcaa
caaccggaatggcaccgagccaacctttaccagcgttttatctatgctctccacgaaagc
gatatttgtcctcccggtttacccaagcgggtgtttatttgcggtgtatccgcgttaccg
ccgatttatctgtcagcgcttcaagcgctgggtaaacatattgatatccatctgatgttt
accaacccatgtcgctatttttggggggatatccaaaattatgctttcttggccaaatta
cagagtcgtaagcgtcgtcattatcgagagaaaacagagctgagtttatttcgtgaaccc
gaacaggcggcacggctatttaatgatgatggggaacaaaacctgagtaatcctctcttg
gcctcatggggacgcttggggcgtgaccatatgtatttgctgtcccaggtggatgaaatt
caggaagttcaagctttcgttgatattgagccggataaccttttacatgcaatccagcac
gatatgctggagctggaagatcatgccattattggaaccacacaggagacattgtcctcc
agtaacaaaaaacgacggttagatccaaaagatcgttcgatcagccttcatgtatgccat
agctcgcagcgtgaagttgaagtcctacaggatcaactattggccatgttggaggccgat
cctgaactcacgccaagagatattattgtgatggtggcggatatcgatagctatacgcct
tatattcatgcggtttttgctaatgctccatttgaacgccatttaccttttgcgatttcg
gaccgcaaggccagccaggcacatcctgctcttcaggcttttattacactattggatttg
ccgcaaagccgctttacctccgagcaagtactcgcccttttagaagtgccagcgctggcg
aacagatttggcattgatgagcatgggttgcggcgactacgtcagtgggtcggagagtcg
ggtattcgttgggggctggatgatgataacgtacgtgaactgtcgctacccgccaccggt
caacacacttggcgcttcggattaacgaggatgctattgggctatgcgatgagtagtgat
gcaggtaactggcatgacgttctgccgtatgatgaatccagtggattagctgcggagttg
gttgggcaactggctgatatgctaatgcaactcagtcactggagagcacaacttgctgag
gcacgaactctggtggcgtggtcaccgctatgtcgccaaatgcttgatgcctttttcgaa
caagacaacgaaaccgaggcggtactcgcgcttatagaacaacaatggctgaaagtgatc
agctatggcataagtgcccaatatccagatgtcgtcccgctaacgttattaagggacgaa
ttggccgcacgtcttgataacgaaaggattagtcagcgattcttagctggaccaattaac
ttttgtacattgatgcccatgcgctctataccgtttaaagtggtttgcctgttgggtatg
aatgatggcatttatccacgcacattaccgcctttaggattcgacttaatggccaggcag
atccagcgtggtgaccgtagccgacgtgatgatgaccgctaccttttccttgaagcactt
ttatctgcacaacaacgcctctatatcagttatatcggccgttctattcaggataacagc
acgcgctacccttcggttttagtcagtgaattgatcgaatatattgggcagagtttccat
ttacccggcgatgaagccgcaagcgtggatgaaagtgagcagcgtgttactgctcactta
ctaaactggcatcctagagtgccattcgcggcagaaaactttgaacgagatagtgcaata
caaagctatgcggccgagtggttacctgccgctgcagcgaaagggcaagctcatcctgat
tttaatcagccgctattgcctgagccgatcagcgagatattactggacgatttaatccgc
ttttatcgtcaccccgtccgagcttttttccagcggcggcttggtgtcaactttgtgata
gaagaaaccgaattgccagatgaagagccctttaccgtggacaaccttagccgctatcaa
ctcaatacccagttattgaatgccttaattgatgatggggatgcaaataaagtttttgcc
agagcgagagccagcggcgaattaccattcggtgcttttggcgagatttactggcaaggg
caggtagaggagatggcattgcttgcggaacagattcgtaacgaacagggcgatgccgat
agcctggaactaaacattgttctggaaaatataaccataaccggttggatgcaccaggtt
cagaccgatggcttgatgcgttggcgtcctgcggcactgacggtcgttgatgccttacta
ctctgggtcgaacatgtagtctattgtgccgccggtggaagtggtgagagccgaatttat
ggtagaaagggaaccgtatggcgttttggcccattagatgagtcgaaagccagagcttat
ttgcaaacattggtggagggctatcagggaggtatgagccagccgttaatgttattgagt
aaaacgggctgggcctggttgagccagtgctttgactcagagagtggggaaattctttgg
gatgacgagactcaagataaagcccgagggaaattgctgttagcctggcaagggtcacag
caaatttcaggtgaaggtgaagatccttatatccaacgggttttccggtgtatggataat
gatcgattggccgtgatcttacaggaaacggagcgttacttattacccgttatgcgccat
aaccgagcttaa
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