Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_08740
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Entry
UGYR_08740 CDS
T03887
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00730
Thiamine metabolism
yrb01100
Metabolic pathways
yrb01240
Biosynthesis of cofactors
Module
yrb_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
UGYR_08740
Enzymes [BR:
yrb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
UGYR_08740
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
LHH
Motif
Other DBs
NCBI-ProteinID:
AKA38474
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Position
1928462..1930498
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AA seq
678 aa
AA seq
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MSNNTHSSSLADTAKPTARPRKAISRKEQREDAQQFIDTLQGVSFPNSRRIYLQGSRSDL
QVPMREILLSPTLIGGGKDDPRYEDNEAIPVYDTSGPYGDPLATLDVHAGLPKLRDNWIA
DRQDTAALVGVSSGFTQQRLADEGLDHLRFEQLPRPKKAIAGKCVTQLHYARAGIVTPEM
EFIAIRENMGRERIRGAVLRHQHPGQAFGANLPENITSEFVRQEVAAGRAIIPANINHPE
SEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSIRWGADTVMDLSTGRYIHETREW
ILRNSPVPIGTVPIYQALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVP
MTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICQICAAYDVSLSLGDGLRPGSIQ
DANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTL
GPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAH
AADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPETARAYHDETLPQESGKVAHFCS
MCGPKFCSMKISQEVRDYAAAQENAAALETSAQPIQIQTSIQSQQSGMKQMSEEFRSRGS
ELYHSANIRQVEIDDEQA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatactcactcgtcctctttggctgataccgccaagcccactgcccgtcca
cgtaaagctatttcacgtaaagaacagcgcgaagatgctcagcagtttattgacacgctg
caaggtgtcagcttcccaaattcccgacggatctatctgcaaggatcacgatccgacctt
caggtaccgatgcgcgagatcctgctcagcccaaccttgatcggcggtggcaaagacgat
cctcgctatgaggataacgaagcgatcccggtgtatgacacttccggtccttatggcgat
cctctggctacattagacgttcacgccgggttaccgaaactgcgcgataactggatcgcc
gatcgtcaggatactgcagccttggttggcgtcagctccggttttacccaacaacgtttg
gccgacgaagggttagatcatttacgttttgaacagttaccgcgcccgaaaaaagccatt
gccggtaaatgtgtgacccagttgcactacgccagagcgggtattgtcactccggaaatg
gaatttattgccattcgcgaaaatatgggccgtgaaagaattcgtggtgcggtgttacgc
caccagcatccaggacaagcctttggtgccaatctgccggaaaatattacatcggagttt
gttcgccaagaagtggccgctggccgcgcaattatccccgcgaacattaaccaccccgaa
tctgaaccgatgattattggccgtaatttcctggtaaaagtcaatgccaatatcggtaat
tccgcagtgacatcctccattgaagaagaagtggagaagttggtgtggtcgatccgttgg
ggcgcagataccgtaatggatttatctactggtcgttatattcacgaaacccgcgagtgg
attttacgtaacagcccggtgccaattggtactgtaccgatctatcaggcattggaaaaa
gtgaacggtgtggcagaaaatctgacctgggaaatgttccgcgacactttattagaacag
gcggagcaaggcgtagactatttcactatccatgccggtgtattactgcgctatgtgcca
atgaccgccaagcgcctgactggcatagtctcacgcggtggttcgattatggccaaatgg
tgtttgtcccaccatcaggagaacttcctgtatcagcatttccgcgaaatctgccagatt
tgtgccgcctacgacgtttcattatcgctgggtgacggcctacgccctggttctattcaa
gatgccaatgatgaagcccaattcgccgaactgcatactttgggggaattgaccaaaatt
gcctgggaatatgatgtgcaggtgatgatcgaaggcccaggacatgtgcccatgcagatg
atccgccgtaacatgaccgaagaactggaacactgccacgaagcgccattttacacctta
ggaccgttaactacagatatcgctccgggttacgatcatttcacttccggcattggcgcg
gcgatgattggctggtttggttgcgccatgctgtgctacgtgacgccgaaagagcatctg
ggtctgcctaataaagaagatgtcaaacaggggcttattacctacaaaatcgcggctcac
gcggcggatctggctaaaggacaccctggcgcgcagatccgcgacaatgctatgtccaaa
gcgcgttttgaattccgctgggaagatcagttcaatttagcgctcgatcccgaaaccgcc
cgtgcttaccacgatgaaaccttgccacaggaatccggtaaggttgcccatttctgttca
atgtgtgggccaaaattctgttcaatgaagatctcgcaggaagtacgcgactatgcggca
gcgcaggaaaatgcggcggcactggaaacctcggctcaacccattcagatccaaacctcg
atccaaagtcagcaatcaggcatgaaacagatgtctgaggaattccgctctcgcggcagc
gagttgtaccacagcgccaacattcgtcaggtggagatcgatgatgaacaagcctga
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